Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0782 ATGAATTCGAATCCTCCTTCTCAGTTTTACAACACCTCCATTGCAGCAGAAGCATCGCCATGGTGGAACGACAGAGCCGACAATGAGTGGCAGCTCACAGCAGCAACCTTAGTGGGCCTCCAGAGCGTTCCTGGGCTCGTGATCCTATACGGCAGCATGGTCAAAAGAAAATGGGCCGTCAACTCCGCCTTCATGGCCCTATACGCCTTTGCGGCGGTTCTGATCTGTTGGGTCCTGTGGGCCCATCGAATGGCCTTTGGACCCAAGTTCATGCTGTTGGCCGGAAAGCCCAACCCTGCTCTGACGGAGAAGTTTCTGCTTTCTCAGTCCATACATGGCATGTTTGCGATGGCGGATTATGTGTTTTATCAGTTTGCTTTTGCTGCGATTACTGTGATATTGCTTGGAGGGTCGTTGTTGGGGAGGATGAACTTCTACGCGTGGATGCTGTTTGTGCCTCTATGGACCACACTGTCTTACACCATAGGTGCTTTCTGCATATGGGGGAATGGGTTTTTTGGAGATAAGATAATAGATTATGCTGGCGGCTTCGTCATTCATCTTTCTTCTGGTGTGGCTGGCTTCACTGCTGCTTACTGGGTTGGGCCAAGAATATCAGAAGACAGGCGAAACTTTCCTCCTAACAACATAATTCACGTACTGGGAGGGGCAGGGTTTGTGTGGATGGGCTGGACAGGGTTCAATGGAGGAGCTCCATTTGAAGCGGGGACGATTGCTTCATTGGCCATCTTCAACACCCATCTCTGCACTGCCACAAGTCTTCTCGTCTGGCTTTCTCTCGACATGCTTGTCTATAACAAGAGCTCCGTCGTCGGTGCCGTCCAGGGCATGATCACTGGCCTCGTCTGCATCACTCCCGCTGCAGGGTTGGTAGATTCATGGGCTGCCGTAGTGATGGGAGTTCTATCTGGTTCAATACCATGGTACACCATGATGGTACTGCACAGAAGATCTGCCTTCTTCCAAAGTGTGGACGACACGCTTGGAGTGTTCCACACTCATGCAGTGGCAGGAATTCTAGGAGGATTCCTCTCTGGTGTGTTCGCGAAACCCATTCTTCTTAAGACGATGTACCCTGAAACACCATATGGTCCAGGTTTATTATACGGCTTCAAAGATGGGAACATGGATCTAGGGTTGAAGCAAGCAGGGTATCAGCTTGTGGGAGCAGTTTTTGTTACAGTGTGGAACGCCGTTGTCACGAGCCTCATCTGTATTCTGATTAGCCGAATGGTGGATCTGAGGATGAAGGAAGAGGAGCTTGAGGTCGGAGACGATGCAGCTCATGGAGAAGAAGCCTATGCCTTGTGGGGTGATGGAGAGAGAATGCGAGTCCCTCTTCGTCTCCATATTAGTCCAGCTCTTCCTTCCATGTGCCGTGGCCGGCTTTCCATTCCCATTACTACTCAAGAAATGAGATAG 1443 0.5059 MNSNPPSQFYNTSIAAEASPWWNDRADNEWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFAAVLICWVLWAHRMAFGPKFMLLAGKPNPALTEKFLLSQSIHGMFAMADYVFYQFAFAAITVILLGGSLLGRMNFYAWMLFVPLWTTLSYTIGAFCIWGNGFFGDKIIDYAGGFVIHLSSGVAGFTAAYWVGPRISEDRRNFPPNNIIHVLGGAGFVWMGWTGFNGGAPFEAGTIASLAIFNTHLCTATSLLVWLSLDMLVYNKSSVVGAVQGMITGLVCITPAAGLVDSWAAVVMGVLSGSIPWYTMMVLHRRSAFFQSVDDTLGVFHTHAVAGILGGFLSGVFAKPILLKTMYPETPYGPGLLYGFKDGNMDLGLKQAGYQLVGAVFVTVWNAVVTSLICILISRMVDLRMKEEELEVGDDAAHGEEAYALWGDGERMRVPLRLHISPALPSMCRGRLSIPITTQEMR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0782 480 ProSitePatterns Ammonium transporters signature. 179 204 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere13g0782 480 Gene3D Ammonium transporter AmtB like domains 3 444 IPR029020 -
Dere13g0782 480 PRINTS Rhesus blood group protein signature 124 140 IPR002229 GO:0005886
Dere13g0782 480 PRINTS Rhesus blood group protein signature 218 236 IPR002229 GO:0005886
Dere13g0782 480 PRINTS Rhesus blood group protein signature 249 271 IPR002229 GO:0005886
Dere13g0782 480 NCBIfam ammonium transporter 27 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere13g0782 480 SUPERFAMILY Ammonium transporter 22 422 - -
Dere13g0782 480 PANTHER AMMONIUM TRANSPORTER MEP2 14 450 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere13g0782 480 Pfam Ammonium Transporter Family 30 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0782 Dere-ChrDere13 9676859 9679003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0782 117 474 Inorganic Solute Cotransporters AT2G38290 55.495 2.16e-134 390