Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0778 ATGGATATACGGTTCCCCTACTCGCCGGCTGAGGTCGCCAAAGTCCGTCTGGTTCAGTTCGGCATACTCAGCCCCGATGAGATCAGACAAATGTCTGTGGTGCAGATTGAACATGGAGAGACAACAGAGAGGGGCAAGCCGAAGATTGGGGGATTGAGTGACCCTAGGCTTGGTACTATTGATAGGAAAATGAAGTGTGAAACTTGTACTGCAAACATGGCTGAGTGCCCGGGCCACTTTGGGCACCTAGAGCTTGCAAAGCCCATGTTTCATATTGGGTTCATAAAGACTGTGCTCACCATTATGCGTTGCGTTTGCTTCAACTGCTCTAAAATTCTTGCCGATGAGGAAGATCACAAGTTTAAGCAAGCTCTGAGGATCAGGAATCCCAAAAATAGGCTGAAAAAGATTTTGGATGCCTGTAAAAACAAAACCAAATGTGAAGGTGGTGATGAGATTGACGTCCATGCACAAGACTCTGACAAACCAGCTAAAAAGAGCCGTGGTGGCTGTGGTGCCCAGCAACCAAAGCTCACTATTGAGGGTATGAAAATGATTGCAGAGTACAAAGCTCAAAGGAAGAAAAGTGATGACCAGGAACAGGTTCCTGAGCCTGTGGAAAGGAAGCAGACTCTTACTGCTGAAAGGGTTCTTAGTGTTTTGAAAAGGATTAGTGACGAGGACTGCCAATTATTGGGTTTGGACCCTAAGTATGCCCGTCCTGACTGGATGATTTTACAAGTTCTTCCAATTCCTCCACCGCCTGTGAGGCCTTCTGTAATGATGGACACATCCTCTAGGAGTGAGGATGATTTAACTCATCAGCTGGCAATGATCATCAGGCACAATGAGAATCTGAAGAGACAGGAGAGAAATGGATCACCTGCACATATTATTTCTGAGTTTGCTCAGTTGCTGCAGTTTCACATCGCTACATATTTTGATAACGAGTTACCTGGGCTGCCAAGGGCTACACAAAGGTCAGGGAGGCCTATCAAGTCAATATGTAGCAGGCTTAAGGCAAAAGAAGGCCGGATTAGAGGTAACTTGATGGGGAAGAGAGTTGATTTTTCAGCACGAACAGTAATTACACCAGATCCTACGATTAACATTGATCAATTGGGAGTACCATGGAGTATTGCTTTGAATCTTACATACCCTGAGACCGTGACTCCTTACAACATTGAAAGGTTGAAGGAACTAGTTGAATATGGACCCCATCCTCCCCCTGGAAAAACCGGTGCCAAGTACATTATTCGAGATGATGGGCAAAGGCTTGATCTCCGATATTTAAAGAAAAGTAGTGATCACCATTTGGAGCTAGGATACAAGGTGGAGCGTCATTTGAATGATGGAGACTTTGTCCTCTTCAATCGTCAACCCAGTCTTCACAAAATGTCTATCATGGGGCACAGAATCAAAATCATGCCTTATTCTACTTTCCGGTTGAATTTGTCAGTTACTTCACCATATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACCAGAGCAGAGGTATTGGAGCTGATGATGGTGCCTAAGTGCATTGTGTCACCTCAGTCGAATCGCCCAGTCATGGGAATTGTCCAAGATACACTTCTAGGCTGTAGAAAAATCACTAAGAGAGATACCTTCATCACAAAGGATGTTTTTATGAACATTTTGATGTGGTGGGAAGATTTTGATGGCAAAGTTCCAGCTCCTGCAATATTGAAGCCAGAGCCATTGTGGACAGGAAAACAAGTTTTTAATCTCATCATACCAAAGCAAATAAATCTCATTAGATATTCTAGCTGGCACCAAGAGGGTGAAACTGGGTTTGTAACTCCGGGTGATACTGTTGTCAGAATAGAGAAAGGGGAATTACTTACTGGAACCCTATGTAAAAAGACACTTGGAACATCTACTGGAAGTCTTGTACATGTCATTTGGGAGGAGGTTGGCCCTGATGCAGCTCGTAAATTCCTTGGTCATACTCAGTGGCTTGTCAACTACTGGCTTTTGCAGAATGGTTTTACCATTGGAATTGGTGACACCATTGCTGATGCGGCTACTATGGAGACTATTAATCAGACTATTGCTAATGCTAAAGAGGAAGTGAAAAGACTTATTAGGGAAGCACAGGAGAAGAAGCTGGAGGCTGAACCTGGGAGGACAATGATGGAGTCGTTTGAAAATAGAGTGAACCAGACACTAAATAAAGCTCGTGATGATGCTGGAAACAGTGCACAGAAAAGTTTATCTGAGAGTAATAATCTGAAAGCAATGGTTACAGCTGGTTCAAAAGGAAGTTTCATTAACATATCTCAGATGACTGCTTGTGTGGGCCAGCAAAATGTTGAGGGTAAACGAATTCCATATGGGTTCATTGATCGAACATTGCCCCACTTTACTAAGGATGATTATGGGCCTGAAAGCCGTGGCTTTGTAGAGAACTCATATCTTCGTGGACTAACCCCTCAAGAGTTCTTTTTCCATGCCATGGGTGGAAGGGAAGGTCTTATCGATACTGCAGTCAAGACTTCTGAAACTGGGTACATCCAGCGGCGACTTGTAAAGGCTATGGAGGACATTATGGTTAAATATGATGGGACAGTTAGGAACTCACTGGGAGATGTTATTCAGTTTCTGTATGGAGAAGATGGTATGGATGCTGTTTGGATAGAAACACAGAAGTTGGATTCCTTAAAAATGAAAAAGTCAGAATTTGATAGGGTTTTCAGGTATGAGTTTGATGATGAAAACTGGAAACCTAATTACATGCTTGAAGAACCTGTAGAAGACTTGAAAACCATCAGAGAGTTCCGTAATGTCTTTGAGGCTGAAGTTCAGAAGCTGGAAGCTGACAGATACCAACTTGCAACTGAAATAGCAACTACTGGAGATAGTTCTTTGCCTCTACCTGTTAATCTGAAGAGACTTATCTGGAATGCTCAGAAGACATTTAAAGTTGATTTCAGAAGGCCTTCAGATATGCATCCCATGGAAATCGTTGAAGCAATTGATAAGCTCCAAGAGAGACTGAAGGTTGTTCCTGGTGAAGATCTTTTGAGTCAAGAAGCTCAGAAGAATGCAACTCTCCTGTTCAATATTCTTCTCCGTAGTACTTTTGCAAGTAAAAGGGTCTTGGAGGAATACAGGCTCTCTCGTGAGGCATTTGAGTGGGTTGTGGGGGAAATTGAGTCGCGATTTTTACAGTCACTTGTGGCCCCAGGTGAAATGATTGGTTGTGTTGCAGCCCAATCCATTGGTGAGCCTGCCACTCAAATGACTCTCAACACTTTCCACTATGCTGGTGTCAGTGCTAAGAATGTTACTCTTGGTGTTCCTAGGTTGAGGGAAATTATTAATGTAGCAAAGAGAATCAAAACACCTTCTCTCTCTGTCTACTTGAAACCTGAGGTCAATAAGACTAAAGAGAGGGCAAAGAATGTGCAATGTGCCTTGGAATATACTACTCTTAGGAGTGTTACGCAAGCGACAGAAGTGTGGTATGATCCAGACCCAATGAGTACAATTATTGAAGAGGATGTTGATTTTGTGAAGTCCTACTATGAAATGCCAGATGAAGAAGTTGCCCCTGAAAAAATATCACCTTGGTTGCTTCGCATAGAACTAAATCGTGAGATGATGGTGGATAAGAAGCTGAGCATGGCTGACATTGCTGAAAAGATCAACCTTGAATTTGATGATGATTTGACATGTATATTTAATGATGACAATGCTGAAAAACTTATACTTCGTATCCGTATTATGAATGATGAAGCTCCAAAGGGAGAAATTCAGGATGAATCTGCTGAAGATGATGTTTTCCTAAAGAAAATAGAGAGCAACATGCTGACGGAAATGGCTTTACGAGGCATCCCAGACATCAACAAAGTTTTTATTAAAAATACTAAAATTCAGAAGTTTGATGAGAATATGGGTTTTAGGCCACATGATGAGTGGATGCTTGATACTGAAGGCGTCAATCTTTTAGCTGTTATGTGTCATGAAGATGTTGATGCATCAAGGACCACAAGTAATCACTTGATTGAAGTGATTGAAGTTCTAGGTATTGAAGCAGTTCGTCGCGCTCTGCTGGATGAGTTACGTGTTGTTATATCTTTTGATGGTTCTTATGTCAACTACCGGCATCTGGCTATTCTCTGTGATACTATGACTTATCGGGGCCATTTGATGGCAATTACCCGCCATGGCATTAATCGGAATGATACTGGGCCAATGATGAGATGCTCATTTGAAGAGACAGTGGACATTCTCCTTGATGCTGCGGTGTATGCAGAGTCTGATTACTTGAGGGGTGTCACTGAAAATATTATGTTGGGCCAGCTTGCCCCCATTGGAACTGGAGGCTGTGCTCTGTATCTCAATGATGAGATGCTGAAGAATGCTATTGAGCTCCAGCTACCTAGTTATATGGATGGTCTTGATTTTGGCATGACACCTGCACGATCCCCAGTCTCAGGAACTCCTTATCATGAAGGCATGATGTCTCCAAGTTATTTGCTTAGCCCAAATCTCCGGCTGTCACCTACTACTGATGCACAATTTTCTCCCTATGTTGGTGGAATGGCATTCTCTCCAACATCATCTCCTGGTTACAGTCCATCATCACCGGGCTATAGTCCATCATCGCCTGGTTACAGCCCCACCTCACCCGGGTACAGCCCCACCTCACCCGGGTACAGCCCCACCTCACCCGGGTACAGCCCCACCTCTCCTACCTATAGTCCTAGCTCTCCAGGATATAGTCCAACAAGTCCTGCATATTCACCTACAAGCCCATCATATTCACCTACATCGCCAAGTTACAGCCCCACTTCTCCAAGCTACAGCCCCACCTCGCCAAGCTACAGCCCTACCTCGCCAAGCTACAGTCCCACCTCCCCTGCATATAGCCCCACATCCCCTGCCTACAGCCCCACCTCCCCTGCCTACAGCCCCACTTCTCCTTCGTACAGCCCTACATCACCATCTTATAGCCCAACATCACCATCCTATAGCCCTACTTCACCATCCTATAGCCCGACTTCACCCTCTTACAGCCCTACATCTCCATCATATAGCCCTACTTCTCCTGCGTATAGCCCCACCTCTCCTGGCTACAGTCCTACTTCACCTAGTTACAGCCCAACTTCACCAAGTTATAGCCCTACTTCCCCTAGTTACAACCCACAGTCTGCTAAGTACAGTCCGTCGCTGGCTTATTCCCCCAGCAGTCCAAGGTTATCTCCATCGAGTCCGTACAGTCCCACGTCCCCAAATTACAGCCCAACGTCTCCATCATATTCACCAACATCTCCATCCTATTCTCCATCAAGCCCAACATACAGCCCCAGCAGCCCATATAATTCTGGCGTAAGTCCGGACTACAGTCCAAGTTCTCCACAATTTAGCTATAGATTCCCAGTACTGGTTACTCACCAAGTCAACCTGGGTATTCACCGTCATCAACTAGCCAGTACACACCACAGACAAGTGACAAGGATGATCGGAGTACTCGCTGAGCTTAAATTATTGAAAATTCCACGTGATTTCGATTCGGTTCACAGATGGAATCAAAAGTTCTTATCATTTTCTCGCTTTTCGATTTCTTGCAAAAGTCCCTTTTTCCTCCTCTGTAGTTATCGAATTCACATTAGGCACCGCACCGGCGCAATGGCGGAGAATGGGTCCGGCGAGAAAGGGGTCAGCTATCTTCACGGTGACCTGGACTTGACAATCATTGAGGCTCGAAGGTTGCCCAACATGGATATTGTCTCCGAGCATTTCCGCCGCTGTGTAACCGCCTGTGACACTATCAAATTCCGCTCCTCTGACTCCAGCGGCGGTAGCAACAGCAAAATCCACCGTCGCCGGAGGATTATCACGAGCGACTCGTACGTCACAGTTTCGTTGCCGCAAGCTACTGTTGCCCGTACACGTGTGATAAAGAATGCGCAGAACCCTCAGTGGAACGAGCGTTTCAATATCCCCTTGGCACACCCCGTGGAGGATTTGGAGTTTCGGATTAAAGACGACGATGTATTTGGTGCTCAGCTTGTGGGAACCGTTAAGATTCCTGCGCAGAGAATTGCCTCCGGTGAGTTTATTTCCGGGTGGTTCCCTATTATCGGATCCTCCGGCAAGCCACCCAAGCCCGAAACCGCTCTTCGTGTTGAAATGAAGTTCATAGCCGTTGAAGAGAACTCGCTGTACAAGCGAGGCATTGCGGCTGATCCAGAGCACAAGGGTGTCAGGCACACGTATTTTCCAGTGCGGAAGGGAAGCTCAGTGAGGTTGTACCAAGATGCCCATGTTCCTGATGGGATTCTACCTGAAATAAAGCTAGAGGGAGGAGAGGTTTATAGGCATGGAAAGTGTTGGGAAGATATTTGTTACGCTATATCTGAGGCTCATCATATGATTTATCTTGTGGGTTGGTCAATCTATCACAAAGTGAAGATTGTTAGGGAACCCAGTAGGCCTTTGCCCCGAGGTGGGAATTTGACTCTTGGTGAATTGCTCAAGTACAAGTCTGAAGAAGGGGTGCGAGTTCTGTTGCTGGTTTGGGATGATAAGACTTCCCATGACAAGTTATTTATAAAGTCGGCTGGATTAATGCAGACACATGACGAAGAAACCAGGAAATTTTTTAAACATTCTTCTGTTATGTGTGTTCTAGCACCTCGGTATGCTAGCAGCAAGTTGAGTTATATGAAGCAACAGGTTGTTGGAACTGTTTTTACACATCACCAAAAGTGTGTACTTGTGGACACACAAGCTTTTGGTAATAACCGGAAGGTAACTGCATTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTATGACACGCCTGAGCATCGACTTTTTCGTGATCTTGATACTGTATTTTCTGGTGATTTTCACAATCCTACATTTTCAACTGGAACAAGGGCTCCTAGGCAACCGTGGCATGATTTGCACTGTAGAGTAGATGGGCCTGCTGCATATGATGTTCTTCTAAATTTTGAGCAGCGATGGAGAAAAGCAACAAAGTGGAAAGAATTTGGAATACTTTTCAAAAAGGCTTCTCATTGGCATGATGATTCTTTACTGAAAATAGAACGTATCTCTTGGATATTAAGTCCTTCCTTGCCTCTCTCGAAGGATGGTACCACTATTGTTCCTGGAGATGACCCTTCATTACAGGTTACCAATGAAGATGATCATGAAAACTGGCATGTTCAGATATTGCGCTCCATTGACTCAGGATCCCTGAAAGGGTTTCCCAAAGATGTTGATGTTGCTCAGTCTCAGAATCTTACCTCCGCTAAAAATTTAAAGATAGATAAAAGCATTCAAACAGCATACATTCAGGCAATCAGATCTGCTCAACATTTTATTTATATTGAAAACCAATATTTTCTTGGATCATCATTTGCTTGGCCATCTTATAAAGATGCAGGGGCTGATAACCTCATTCCAATGGAGCTGGCACTGAAAATTGCTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTGTATATTATTGTACCAATGTGGCCAGAGGGTGATCCTAAATCAGCAGCTATGCAAGAAATTCTCTTTTGGCAGGGCCAGACAATGCAAATGATGTATGATGTTGTTGCAAGAGAATTGAAGTCAATGCAACTTACCGATTTGCTTCCACAGGATTACCTCAACTTCTATTGCCTTGGTAACCGAGAAGAATTTCATGAAGAAAGCTCAAGTTCAAATGATGCTTCAGTCTCCAGTTCATATAAATATCGTCGATTTATGATTTACGTGCATGCTAAGGGGATGATCGTTGATGATGAGTACGTTATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGCACAAAGGATACTGAGATAGCTATGGGTGCATATCAACCTCATCACAGTTGGTTTGCTAGGAAAAGACATCCATACGGTCAGATTTATGGTTACAGAAAGTCTCTGTGGGCAGAGCATCTAGGGATGTTAGAAGCAAATTTTGAAGAACCAGAGAGTTTGGAGTGTGTGCGTAAAGTTAATGCGATTGCTGAAGAGAACTGGAGAAGGTACACTTCAGAGGACTTCTTATTGCTGCAGGGACATATTCTCAAGTATCCTATACAAGTAGATGCTGATGGGAAGGTTAGCCCTATACCTGGACACGAGAATTTTCTGGATGTTGGTGGTAGAGTACTGGGGACTCACTCCCCTACAATTCCAGATATCCTAACAACATAA 8253 0.4413 MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLTIMRCVCFNCSKILADEEDHKFKQALRIRNPKNRLKKILDACKNKTKCEGGDEIDVHAQDSDKPAKKSRGGCGAQQPKLTIEGMKMIAEYKAQRKKSDDQEQVPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQINLIRYSSWHQEGETGFVTPGDTVVRIEKGELLTGTLCKKTLGTSTGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADAATMETINQTIANAKEEVKRLIREAQEKKLEAEPGRTMMESFENRVNQTLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKSEFDRVFRYEFDDENWKPNYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKIQKFDENMGFRPHDEWMLDTEGVNLLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSYRFPVLVTHQVNLGIHRHQLASTHHRQVTRMIGVLAELKLLKIPRDFDSVHRWNQKFLSFSRFSISCKSPFFLLCSYRIHIRHRTGAMAENGSGEKGVSYLHGDLDLTIIEARRLPNMDIVSEHFRRCVTACDTIKFRSSDSSGGSNSKIHRRRRIITSDSYVTVSLPQATVARTRVIKNAQNPQWNERFNIPLAHPVEDLEFRIKDDDVFGAQLVGTVKIPAQRIASGEFISGWFPIIGSSGKPPKPETALRVEMKFIAVEENSLYKRGIAADPEHKGVRHTYFPVRKGSSVRLYQDAHVPDGILPEIKLEGGEVYRHGKCWEDICYAISEAHHMIYLVGWSIYHKVKIVREPSRPLPRGGNLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLFIKSAGLMQTHDEETRKFFKHSSVMCVLAPRYASSKLSYMKQQVVGTVFTHHQKCVLVDTQAFGNNRKVTAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFSTGTRAPRQPWHDLHCRVDGPAAYDVLLNFEQRWRKATKWKEFGILFKKASHWHDDSLLKIERISWILSPSLPLSKDGTTIVPGDDPSLQVTNEDDHENWHVQILRSIDSGSLKGFPKDVDVAQSQNLTSAKNLKIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYIIVPMWPEGDPKSAAMQEILFWQGQTMQMMYDVVARELKSMQLTDLLPQDYLNFYCLGNREEFHEESSSSNDASVSSSYKYRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHSWFARKRHPYGQIYGYRKSLWAEHLGMLEANFEEPESLECVRKVNAIAEENWRRYTSEDFLLLQGHILKYPIQVDADGKVSPIPGHENFLDVGGRVLGTHSPTIPDILTT 2750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0778 2750 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1908 2063 IPR035892 -
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 1416 1460 - -
Dere13g0778 2750 Gene3D - 1160 1295 IPR038593 -
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 4 714 818 IPR007083 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 ProSiteProfiles C2 domain profile. 1892 2044 IPR000008 -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1620 1626 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 2 352 520 IPR000722 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 5 825 1415 IPR007081 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 1160 1295 - -
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 267 315 - -
Dere13g0778 2750 CDD RNAP_II_RPB1_N 18 871 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1662 1668 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 528 681 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1711 1717 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1779 1785 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Gene3D Endonuclease Chain A 2120 2364 - -
Dere13g0778 2750 Gene3D - 1417 1460 - -
Dere13g0778 2750 MobiDBLite consensus disorder prediction 1538 1799 - -
Dere13g0778 2750 Gene3D RNA polymerase II, clamp domain 267 315 IPR044893 -
Dere13g0778 2750 Gene3D RNA polymerase II, clamp domain 4 128 IPR044893 -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1758 1764 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 FunFam DNA-directed RNA polymerase II subunit RPB1 434 527 - -
Dere13g0778 2750 Gene3D - 805 863 - -
Dere13g0778 2750 Gene3D - 864 915 - -
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 385 447 - -
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 689 804 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1765 1771 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 PANTHER DNA-DIRECTED RNA POLYMERASE 19 1463 IPR045867 GO:0003899|GO:0006351
Dere13g0778 2750 MobiDBLite consensus disorder prediction 153 174 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1718 1724 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 FunFam DNA-directed RNA polymerase subunit 4 128 - -
Dere13g0778 2750 FunFam Phospholipase D delta 2121 2365 - -
Dere13g0778 2750 Gene3D C2 domain 1909 2077 IPR035892 -
Dere13g0778 2750 Gene3D Endonuclease Chain A 2414 2640 - -
Dere13g0778 2750 Gene3D RNA polymerase Rpb1, domain 3 528 681 IPR042102 -
Dere13g0778 2750 Coils Coil 694 721 - -
Dere13g0778 2750 Pfam C2 domain 1911 2046 IPR000008 -
Dere13g0778 2750 Pfam PLD-like domain 2454 2632 IPR025202 -
Dere13g0778 2750 CDD RNAP_II_Rpb1_C 1054 1466 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1627 1633 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 MobiDBLite consensus disorder prediction 1538 1752 - -
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 7 1160 1294 IPR007073 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 6 1469 - -
Dere13g0778 2750 Gene3D - 686 804 IPR038120 -
Dere13g0778 2750 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 2249 2284 IPR001736 GO:0003824
Dere13g0778 2750 MobiDBLite consensus disorder prediction 1765 1799 - -
Dere13g0778 2750 Pfam Phospholipase D Active site motif 2249 2284 IPR001736 GO:0003824
Dere13g0778 2750 SMART pld_4 2595 2622 IPR001736 GO:0003824
Dere13g0778 2750 SMART pld_4 2249 2284 IPR001736 GO:0003824
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1772 1778 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 1 14 350 IPR007080 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1669 1675 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 SMART rpolaneu7 242 548 IPR006592 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 SMART C2_3c 1912 2043 IPR000008 -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1683 1689 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1676 1682 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Gene3D RNA polymerase ii 384 447 - -
Dere13g0778 2750 Gene3D - 343 527 - -
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 6 891 1075 IPR007075 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1593 1606 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1670 1683 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1698 1711 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1558 1571 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1726 1739 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1759 1772 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1544 1557 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1628 1641 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1712 1725 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1656 1669 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1621 1634 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1607 1620 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1642 1655 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1579 1592 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1635 1648 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1684 1697 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1551 1564 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1536 1550 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1572 1585 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1600 1613 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1614 1627 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1565 1578 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1773 1786 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1 C-terminal repeat 1586 1599 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam RNA polymerase Rpb1, domain 3 524 687 IPR007066 GO:0003677|GO:0003899|GO:0006351
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1697 1703 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 Pfam Phospholipase D C terminal 2670 2739 IPR024632 -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1606 1612 IPR000684 GO:0003677|GO:0006366
Dere13g0778 2750 CDD C2_plant_PLD 1908 2067 - -
Dere13g0778 2750 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 2595 2622 IPR001736 GO:0003824
Dere13g0778 2750 SUPERFAMILY Phospholipase D/nuclease 2447 2665 - -
Dere13g0778 2750 SUPERFAMILY Phospholipase D/nuclease 2092 2356 - -
Dere13g0778 2750 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1613 1619 IPR000684 GO:0003677|GO:0006366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0778 Dere-ChrDere13 9627014 9644791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0778 1896 2586 Phospholipase D Gene Family (Wang group) AT4G35790 69.914 0.0 1042