Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0776 ATGCTTACTTTGAGTAGAACTATCCTCGTTTTGCTTTCGATTTGGGGCTTTTACGCCTGCTGCCATGCTCGCATCTTCACCTTCACGATGCACCACCGTTTCTCCGAGCCGGTCAAGAAGTGGTCGGAGACCAGCGCCGGAAAGCTCTCTCCGGTGGATCGCTGGCCTGAAAAGGGGGGTTTCGAGTACTATGCGGAATTGGCCGAGCGCGATCGCTTCCTCCGTGGCCGCAAACTTTCTGCTATAAATGATGCACCCCTTGCATTCTCGGATGGCAACAGCACGTTTAGGATCAGCTCGCTGGGATTTTTGCATTATACAACAGTTCAACTTGGGACACCAGGAGTGAAGTTTATGGTGGCACTTGATACGGGAAGTGACCTGTTCTGGGTACCATGTGATTGTACCAGATGTGCAGCAACTGATAGCACAGCTTTTGCTTCAGATTTTGATCTGAGTATATACAATCCTAATGGATCTTCGACGAGTAAAAAGGTCACTTGTAACAACAGTCTGTGTATACACCGCAACCAATGCCTTGGGACTTTCAGCAACTGCCCCTATATGGTGTCTTATGTCTCTGCTGAAACTTCAACAGCTGGAATACTAGTGGAGGATGTTCTGCACCTAACGAAAGAAGATAATGATAATGAACTTTTTGAGGCATATGTCATATTTGGCTGTGGACAAGTTCAAAGTGGATCATTCTTAGATGTTGCAGCTCCCAATGGTTTGTTTGGGCTTGGTATGGAGAAAATATCAGTTCCTAGCATGTTATCCAGAGAAGGCTTTACAGCAGATTCATTCTCCATGTGTTTTGGACGTGATGGCATTGGAAGGATAAGTTTTGGGGACAAGGGTAGCCCTGATCAAGAAGAGACCCCATTTAATTTGAACCCATCGCACCCTACCTATAACATCACAGTCACTCAAGTTCGTGTAGGAACAACTCTAATTGATGTGGAATTTTCCGCTCTTTTTGATTCTGGGACCTCTTTTACATACTTGGTTGATCCAACCTATACAAGGCTTTCTGCGAGTTTTCATTCCCAAGTTAGAGATAGGCGGCGTCCACCTGATTCAAGAATTCCTTTTGAATTTTGTTATGATATGAGTCCTGATGCAAATACTAGCTTGATACCTAGCATGGGTTTAACTATGAGAGGAGGAAGCCATTTTGCTGTTTATGATCCAATAATTATCATTTCTACACAGAGTGACCTTGTATATTGCCTAGCAGTTGTCAAGAGTGCTGAACTAAATATAATAGGACAAAACTTCATGACGGGCTACAGAGTTGTGTTTGACCGAGAAAAGCTCACATTGGGTTGGAAGAAATTTGATTGTTATGACGTTGAGGATCAAATCCCAGCAAAGTCACACTCAAATACCGTCCCTCCTGCCGTAGCCGCTGGGTTTGGGAATCACTCTGCCCCAAAATCAATTAAAAAGACCCGAACCAATTCTCAGGGGTCAAATGCATCACCTTTGCTCTACACCCGTGGTTCACTTCTGTCTTGCTTCGGATTTCTTATATTCCTGGCTTCGCGAAGCTCTTATGGTTACCGTACTTTCGGGTTCGATATCCACCATCGGTTTTCGGATCCGGTTAAGGGAATTCTGGGCACTGACGAGCTACCCGCGAGGGGAAGTCGAGAATATTATGTCGCTATGTCTCACAGAGACCGCGTAATCCGAGGGCGTGGACTCGCCGGTGAGGATCGGACGGCTCTTACGTTCGGCAGCGGCAACGATACTCATCGGATTGCCTCTTTAGGATTTTTGCATTATGCCCAAGTTTCTGTTGGAACACCACCTTTAGGGTTTCTTGTCGCATTGGACACTGGCAGTGACTTGTTCTGGTTACCATGCAATTGTACCGAAACCAATTGTGTGCATGCCTTGAAGACATCAAATGGACAGGTACACATTTACCAGGAATTTTGTGTTGCATTGCATCTTTTGTCATTGGCTCACTACTCTCAGAGATTTCCTCTTAACATCTATGATCCTGATGCTTCATCAACAAGCAAGAATGTTCTATGTAATAGTACCTTATGTAGACATCAGAAACAATGCCCTTCGTCTAGCAGTAGTTGTCCTTATCAAGTTCGCTATCTTACGAGTAACACTTCATCTACTGGAATCCTAGTGGAGGATGTCTTACATTTAATTACAGATGATGATCAGACCAAAGAAGTCAACGCAAGTATTAACTTTGGTTGTGGTAAAGTTCAGACTGGTTCTTTCCTGACTGCTGCAGCTCCAAATGGTCTGTTTGGGCTTGGAATAGAACATACATCGGTTCCCAGCATCTTAGCCAAAGAAAGGCTCACTTCAAATTCTTTCTCCATGTGTTTTGGGCATGACGGTGTTGGAAGAATAAGGTTTGGAGATAATGGCAGCTCAGACCAAGGGAAAACACCATTCAACCTTGGAGGTTTGCACCCAAGTTACAACATCAGCATCACTCAAATTATTGTTGGAGAAAAAGCTGTTGACTTTGGGTTCAATGCAATTTTTGACTCTGGTACCACATTTACATACCTGAGCGACCCAGCTTATACAACCATTACTAAAAGTTTCAATTCCCAGGTAAAAGGAAAACGGTATTTATTTGATCCTCGAGTTGATTTTCCCCTTGAGTATTGTTATGATAATAACACGAGTCCAAATCAGACCAGTCTTAAATTTCCCTCCTTGAATCTAAGAATGAAAGGGGGAGACAATTATTATGTTGCTTATCCAACTGTTGAGGTTGTTTTTGAGGATGTTGGAACTACAACCACTGTAATTTGCCTTGCTGTTGTGAAAGGTGATGACTTGGATATTATTGGACAGAACTTCATGACTGGTTACCGTATAGTCTTCGATCGCGATAACATGAATCTGGGTTGGAAGAATTCTAGCTGTTATGAAGAGGAGGTCTCAAACACATTAGCTGTTTCTCCCCCGCACTCTCCTGCTGTTGACGCAAATCCTGAAACCACACTGAACCAGTCTGATACTTTTAGGCCGCAGCTTCCCAGTCACTCACACTCATCCAAGATCAAAATAATAGTTGCATTTCTACCGGTTCTTCTTGCTGGACTAGTATTACTCGTAATATTGAGACATCATAAACTACTGGAGGTTCAACCTGCAGTCTACAGCGAATTAAAGAAGCTTGTCTTTAGCCCACTTTATTCATCTTTGATTTCCACAGCCAAAAGCTCAGGATTATTGAGTGGTCTTGTTAACATGGCTTTCATAATTGCAGTCCTGAGCTCAATTATTATGTTCTCAGTAGTTCCTATAGGAAATTCACTTAGCTTAAACTACTATGAGAAGACATGCCCCGATTTGGAGTTCATTGTTGCTAAGGTCGTGAAGGAAGCAACTGCTAAGGACAAAACTGTTCCTGCAGCACTTCTGCGAATGCACTTCCATGATTGTTTCATTAGGGGATGTGATGCCTCAGTGCTGCTAAACTCTAAAGGAAACAACAAAGCAGAAAAAGATGGACCCCCAAATATTTCTCTGCATGCATTCTATGTCATTGATAATGCAAAGAGCGAAGTAGACACCTCATGCCCTGGTGTGGTCTCGTGTGCTGACATCCTGGCACTAGCAGCAAGGGATGCAGTTTTTCTGTCTGGAGGTCCTCATTGGGAAGTTCCTAAAGGAAGAAAGGATGGTAGAACATCGCAGGCCAGTGAAACCAGACAATTGCCAGCGCCAACCTTCAACATATTAAAGTTGCAGCAGAGCTTCTCTCAAAGAGGTTTGTCAATGGAGGACGTGGTAGCATTGTCAGGAGGACATACTTTAGGTTTCTCCCATTGCTCATCCTTCCAGAACAGAATCCACAATTTCAATACTACACACGACGTGGATCCTTCATTAAATCCATCCTTTGCAGCAAAACTGAAGTCAATTTGTCCACTCAAAAGTACGGCAAAGAATGCAGGCACCACCATGGACCCTTCTTCAACTACTTTTGATAATACATATTACAAGGCAATCCTCCAAGGGAAGAGCTTGTTTTCTTCTGATCAAGCTCTACTTGATGCCCCAAAGACCAAGGACTTGGTTTCTAAGTTTGCTACCTCAAAAGAGGCTTTCTTCAAAGCTTTTGCAAACTCCATGATCAAAATGAGTAGCATCAATGGCGGGCAAGAGATTAGGAAGAACTGCAAAGTGGTCAACTAG 4191 0.4345 MLTLSRTILVLLSIWGFYACCHARIFTFTMHHRFSEPVKKWSETSAGKLSPVDRWPEKGGFEYYAELAERDRFLRGRKLSAINDAPLAFSDGNSTFRISSLGFLHYTTVQLGTPGVKFMVALDTGSDLFWVPCDCTRCAATDSTAFASDFDLSIYNPNGSSTSKKVTCNNSLCIHRNQCLGTFSNCPYMVSYVSAETSTAGILVEDVLHLTKEDNDNELFEAYVIFGCGQVQSGSFLDVAAPNGLFGLGMEKISVPSMLSREGFTADSFSMCFGRDGIGRISFGDKGSPDQEETPFNLNPSHPTYNITVTQVRVGTTLIDVEFSALFDSGTSFTYLVDPTYTRLSASFHSQVRDRRRPPDSRIPFEFCYDMSPDANTSLIPSMGLTMRGGSHFAVYDPIIIISTQSDLVYCLAVVKSAELNIIGQNFMTGYRVVFDREKLTLGWKKFDCYDVEDQIPAKSHSNTVPPAVAAGFGNHSAPKSIKKTRTNSQGSNASPLLYTRGSLLSCFGFLIFLASRSSYGYRTFGFDIHHRFSDPVKGILGTDELPARGSREYYVAMSHRDRVIRGRGLAGEDRTALTFGSGNDTHRIASLGFLHYAQVSVGTPPLGFLVALDTGSDLFWLPCNCTETNCVHALKTSNGQVHIYQEFCVALHLLSLAHYSQRFPLNIYDPDASSTSKNVLCNSTLCRHQKQCPSSSSSCPYQVRYLTSNTSSTGILVEDVLHLITDDDQTKEVNASINFGCGKVQTGSFLTAAAPNGLFGLGIEHTSVPSILAKERLTSNSFSMCFGHDGVGRIRFGDNGSSDQGKTPFNLGGLHPSYNISITQIIVGEKAVDFGFNAIFDSGTTFTYLSDPAYTTITKSFNSQVKGKRYLFDPRVDFPLEYCYDNNTSPNQTSLKFPSLNLRMKGGDNYYVAYPTVEVVFEDVGTTTTVICLAVVKGDDLDIIGQNFMTGYRIVFDRDNMNLGWKNSSCYEEEVSNTLAVSPPHSPAVDANPETTLNQSDTFRPQLPSHSHSSKIKIIVAFLPVLLAGLVLLVILRHHKLLEVQPAVYSELKKLVFSPLYSSLISTAKSSGLLSGLVNMAFIIAVLSSIIMFSVVPIGNSLSLNYYEKTCPDLEFIVAKVVKEATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNISLHAFYVIDNAKSEVDTSCPGVVSCADILALAARDAVFLSGGPHWEVPKGRKDGRTSQASETRQLPAPTFNILKLQQSFSQRGLSMEDVVALSGGHTLGFSHCSSFQNRIHNFNTTHDVDPSLNPSFAAKLKSICPLKSTAKNAGTTMDPSSTTFDNTYYKAILQGKSLFSSDQALLDAPKTKDLVSKFATSKEAFFKAFANSMIKMSSINGGQEIRKNCKVVN 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0776 1396 PRINTS Haem peroxidase superfamily signature 1195 1212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Haem peroxidase superfamily signature 1320 1335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Haem peroxidase superfamily signature 1260 1275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Haem peroxidase superfamily signature 1213 1225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Haem peroxidase superfamily signature 1134 1148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 CDD secretory_peroxidase 1103 1395 IPR033905 GO:0004601|GO:0042744
Dere13g0776 1396 ProSitePatterns Peroxidases proximal heme-ligand signature. 1260 1270 IPR019793 -
Dere13g0776 1396 FunFam Aspartyl protease family protein 1 92 285 - -
Dere13g0776 1396 FunFam Peroxidase 1238 1379 - -
Dere13g0776 1396 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 325 336 IPR001969 GO:0004190|GO:0006508
Dere13g0776 1396 SUPERFAMILY Acid proteases 100 452 IPR021109 -
Dere13g0776 1396 Gene3D Acid Proteases 802 972 IPR021109 -
Dere13g0776 1396 Gene3D Acid Proteases 288 450 IPR021109 -
Dere13g0776 1396 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Dere13g0776 1396 Pfam Xylanase inhibitor C-terminal 305 445 IPR032799 -
Dere13g0776 1396 Pfam Xylanase inhibitor C-terminal 819 967 IPR032799 -
Dere13g0776 1396 SUPERFAMILY Acid proteases 591 972 IPR021109 -
Dere13g0776 1396 Gene3D Acid Proteases 95 285 IPR021109 -
Dere13g0776 1396 FunFam Aspartyl protease family protein 1 288 451 - -
Dere13g0776 1396 FunFam Peroxidase 1106 1245 - -
Dere13g0776 1396 Pfam Peroxidase 1119 1364 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 MobiDBLite consensus disorder prediction 473 492 - -
Dere13g0776 1396 SUPERFAMILY Heme-dependent peroxidases 1103 1396 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 611 622 IPR001969 GO:0004190|GO:0006508
Dere13g0776 1396 ProSiteProfiles Plant heme peroxidase family profile. 1102 1396 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 120 131 IPR001969 GO:0004190|GO:0006508
Dere13g0776 1396 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 839 850 IPR001969 GO:0004190|GO:0006508
Dere13g0776 1396 Gene3D - 1106 1396 - -
Dere13g0776 1396 ProSiteProfiles Peptidase family A1 domain profile. 596 967 IPR033121 -
Dere13g0776 1396 Gene3D Acid Proteases 586 799 IPR021109 -
Dere13g0776 1396 ProSiteProfiles Peptidase family A1 domain profile. 105 445 IPR033121 -
Dere13g0776 1396 Pfam Xylanase inhibitor N-terminal 106 285 IPR032861 -
Dere13g0776 1396 Pfam Xylanase inhibitor N-terminal 597 799 IPR032861 -
Dere13g0776 1396 PRINTS Plant peroxidase signature 1259 1271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1136 1156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1334 1351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1194 1204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1318 1333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1213 1228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1374 1387 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1112 1131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PRINTS Plant peroxidase signature 1175 1188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0776 1396 PANTHER ASPARTYL PROTEASES 7 443 IPR001461 GO:0004190|GO:0006508
Dere13g0776 1396 MobiDBLite consensus disorder prediction 982 1005 - -
Dere13g0776 1396 FunFam Aspartyl protease family protein 1 583 799 - -
Dere13g0776 1396 FunFam Aspartyl protease family protein 1 802 973 - -
Dere13g0776 1396 Gene3D Peroxidase, domain 2 1238 1379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0776 Dere-ChrDere13 9591451 9607461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0776 1091 1395 Peroxidase AT5G42180 68.301 9.19e-146 444