Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0749 ATGCACTCTACATCACTTTCTCGATTGACAACCTTTAGATCAGCTTCCTGTGACTGCATGATTAAGCTCAAGAACACCCTAGGTTTTGTTTACTTGTCTCTTGCATACACTAGAGCTTCACCTGATGTCATGGAGATTCTGGCTGAAGAACTCATTGCACTGGACCTTGAAACTTGTGAGTCTCTAGCCAGAGACTTGGATACAATTGAGTTCCTGGATCTAAAAGTAGTAAAAGAAGGCCACATAATGGTTTCAAAATATTTTGGCATTCCAAGTGAGGAGAGTTTAGCTACTTTTGAAGTTACTAAAAGCCACAGCTCTGAAGAAGCAGGTATTCAGCTTGTAGAAAGCTTTTCTGCTTGCAATGTTGACTCTATCCAACCTCATAAATATGATAATTCACTAAAGGGCAGTGTGTCGACAAATGAGGTTTCTTCATCCTCTTCTGTGCCTGCAAGCTCTGAGTCACCTGAGCTTGAACAAGTATGCAGAACCAAAGTGAAAATTGTGGATATCAAAGATGTTGATTCTACTCTGAGATACATTTGGGAAAGGTTGAAACCTAATTGTGAAGCTTGTCTTGAAGAGGTTGAAGCAAAGATGAATTGTAAGCTCGAGATAGTAGACCAGTTGCCTGAGTTTTACTCTCTTCCTCCAGATATTCAGATTACTAGCTCAAAGGTATACCAAGGCAAGATATATGGAATTGATGCATCTTCTAGAGTTGCTGTTATGACTTTGAATGTATCACCAGAAGACCACATTCTTGATCTATGTGCCGCTCCTAGTGTTCTTGTGGATGCAGAGTGCACCCATGATGGTTCAATCAAGTATATCCAAAAGTTTGAACATTGGGGTTGGAAAACTCTTCAACATCGTGTGCTAAATTTGAGCCTTCTAATCAATGGTTTCAGGCTACTGAAAGTCAGAGGGTCACTTGTCTACAGCACTTGCAGCTTAACTACTACTCAGAAAGAAGATGTGGTAGAGCAATTTTTGAAAGAAAATGTATCAGCTGAACTGCAGGAGATAGATGCTGCCAGAAGTTGGCCCTGAGGGAAATGGTTAGGGTTTGTGACAGCCATATGGGTTCAAGCAGTATGTGGGAATAATTACACATTTGCTAATTATTCTGACGCATTGAAGAGTCTGATGGCTCTGACGCAACTTCAGCTTAACAATCTTTCTGTTGCTAAAGACGTCGGGAAGGCTTTTGGGATTCTCTCTGGTCTTGCTTCTGATCGTTGGCCTACTTCTGTGATACTCCTCATTGGAGCCTTCATGAGCTTCATTGGCTATGGAGTTCAGTGGCTCGTTGTCAGCCAGAGAATCACTCCTCTCCCTTATTGGCTTATGTGTGTGTTCTTATGTTTGGGAGGGAACAGCTCAACCTGGATGAACACAGCAGTTCTAGTGACTTGCATGAGGAATTTCCCCAAAAATCGAGGCCCAGTTTCTGGAATTCTCAAGGGCTATGTGGGTCTCAGCACTGCAATCTTCACTGACTCATGCACTGCTCTTTTCTCCTCAAATCCCTCTTCCTTTCTCCTCATGCTCACCATTTTTCCTACTCTTATTTGCCTCATTGCCGTTCTTGCCCTTCGCGAAACCCCACCTGCTTCCAATTCTACCCAAGAGAAGCAAGAGACCCAATTCTTCAATATATTCAACATTATTGCTGTCACAGTTGCTTCTTACCTCTTGGCATTTGACATCACTGGACGCCATGGCCGTCTTCTTTCCTTGGTTTTCACCATAGGGCTTGTTATTCTACTAGCCATGCCTCTTCTTGTTCCTTTATATTCGCTTCTCTTCAAATGGAACCTTATTTCTGACGTGGAACGGCAGATTAATGAACCATTGCTTGCTGAAAAGGTTTCGGAAGAAAAAGAAGAGGAGAAGCAAGATGATTCTGTGAGTGGAGGCCCTAAGGTGGAGGAGGAAGGTGAAGTAAAACGACAACCCTTGATAGGGGAGGAGCATACGATCGTTGAAATGGTTAAAACGGTTGATTTCTGGATCTTGTTTGGGTCGTTTCTGTGTGGCGTGGGGACGGGATTGTGTGTGATGAACAACATGGGGCAGATTGGATTGGCGGTTGGTTATACTGATGTTTCTATATTCATATCCTTCATTAGCATTTGGGGATTCTTTGGACGCATTGCTTCTGGCTCACTCTCAGAATACTTCATCAGGAAATCAGGCATGGCAAGGCCAGTTTGGAACGCAGCTTCTCAAATATTGATGGCCGCGGGCTACATTGCAATGGCCATGGCGTTGCCAGGATCACTTTACGTGGGCTCAATGTTGGTGGGAGTATGCTATGGTGTCCGTCTGACCATAACAGTGGCAGCAGCTTCAGAACTCTTCGGACTCAAGTACTACGGTTTATTATACAACATTCTCATTCTGAACCTTCCTCTGGGTTCCTTCATCTTTTCTGGTCTCATTGCTGGGTATCTGTATGATGCTCAAGCCACTAAGGAAGCTGGAGGGGGTAACACTTGCTTTGGGTCACACTGTTACATGCTTGTGTTTGTGATTATGGCCTTTGCTTGTGTCCTTGGATGTGGGTTGGACCTGTTGCTGGCAATTAGAACTAAGAAAGTCTATTCAAAGATTCGCCAAGAGAAGACTCAAAACCTTGATACAACGTCTTTGAATAGTATCGGCTTTGGAATGCTAGTCTATCAGTCTATCCAATTTTCTGCAGACAAAGGGTGGACGTTCATGCCCACCTTAGAGATTTTGAGTACTATCGATGTAGCTGTAACTACTGCTTACTTTATGGGAAATGTCTTATCTTCTATGATTTTTGTGACTTTGATTGGTCACTTTGACAGCACTTTCTTTAAGGATTTCCTCAGAGGCCTTGCTCGTATTGTCAAACTCTTGCTATCAAAAACAGGATCCTCTGAAAATATATCTTTTGAGTCCTAA 2940 0.4299 MHSTSLSRLTTFRSASCDCMIKLKNTLGFVYLSLAYTRASPDVMEILAEELIALDLETCESLARDLDTIEFLDLKVVKEGHIMVSKYFGIPSEESLATFEVTKSHSSEEAGIQLVESFSACNVDSIQPHKYDNSLKGSVSTNEVSSSSSVPASSESPELEQVCRTKVKIVDIKDVDSTLRYIWERLKPNCEACLEEVEAKMNCKLEIVDQLPEFYSLPPDIQITSSKVYQGKIYGIDASSRVAVMTLNVSPEDHILDLCAAPSVLVDAECTHDGSIKYIQKFEHWGWKTLQHRVLNLSLLINGFRLLKVRGSLVYSTCSLTTTQKEDVVEQFLKENVSAELQEIDAARSWPXGKWLGFVTAIWVQAVCGNNYTFANYSDALKSLMALTQLQLNNLSVAKDVGKAFGILSGLASDRWPTSVILLIGAFMSFIGYGVQWLVVSQRITPLPYWLMCVFLCLGGNSSTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDSCTALFSSNPSSFLLMLTIFPTLICLIAVLALRETPPASNSTQEKQETQFFNIFNIIAVTVASYLLAFDITGRHGRLLSLVFTIGLVILLAMPLLVPLYSLLFKWNLISDVERQINEPLLAEKVSEEKEEEKQDDSVSGGPKVEEEGEVKRQPLIGEEHTIVEMVKTVDFWILFGSFLCGVGTGLCVMNNMGQIGLAVGYTDVSIFISFISIWGFFGRIASGSLSEYFIRKSGMARPVWNAASQILMAAGYIAMAMALPGSLYVGSMLVGVCYGVRLTITVAAASELFGLKYYGLLYNILILNLPLGSFIFSGLIAGYLYDAQATKEAGGGNTCFGSHCYMLVFVIMAFACVLGCGLDLLLAIRTKKVYSKIRQEKTQNLDTTSLNSIGFGMLVYQSIQFSADKGWTFMPTLEILSTIDVAVTTAYFMGNVLSSMIFVTLIGHFDSTFFKDFLRGLARIVKLLLSKTGSSENISFES 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0749 979 Pfam 16S rRNA methyltransferase RsmB/F 264 346 IPR001678 GO:0008168
Dere13g0749 979 SUPERFAMILY MFS general substrate transporter 343 869 IPR036259 -
Dere13g0749 979 Gene3D Vaccinia Virus protein VP39 264 361 IPR029063 -
Dere13g0749 979 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 194 344 IPR029063 -
Dere13g0749 979 Gene3D MFS general substrate transporter like domains 362 616 IPR036259 -
Dere13g0749 979 Pfam Nodulin-like 354 600 IPR010658 -
Dere13g0749 979 Gene3D Vaccinia Virus protein VP39 173 263 IPR029063 -
Dere13g0749 979 CDD MFS_Mch1p_like 353 857 - -
Dere13g0749 979 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 355 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0749 Dere-ChrDere13 9388866 9403891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0749 354 878 Nodulin-like Gene Family AT4G34950 64.391 0.0 715