Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0743 ATGTTTGCCGAGTCGGCACCCCGTAATTACGCCCATTGGATAACTCCTTTCCGTGTCCTCACAACGCATTCCACATTTCACTGGGACCCACTCCTCGCCACTCTCTCTCTCTCGCTCCCTCTCTATATATACAAGCCCAATCTCGCATCGTCATACTTCCAACAAATCACAATTCTCAAGCGCTCAAACGACACCGTATCTCACTCTAACATCATGATTGCCCTCTCTTTTCCTGCGTCTCTCTCCGCCTCCGATCTCTGCGGCAAAGCCATCTCTTCGCCACCGCGTCGGGTTGGAACCCGGCCAGTAGTCGCTTTCGCCACCGCCACCGCCACCGCCACTGAGGATCGGTATACTTCTACTGAGCAACGAAGGCCGTCGTATCTGAACCCCCACGGCCTGGCTTCGTGCGGGTCGCTCTACGACGTTCTAGGAATTCCCGCCGTCGCCTCCAATCAAGAGATCAAGGCGGCGTACCGGCGATTGGCGAGAGTTTGCCATCCGGATGTGGCGGCGATCGACCGGAAAAGCTCGTCGGCCGATGAGTTCATGAAGATTCACGCTGCCTACTGCACTCTATCGGATCCCGAAAAGCGCGCCAATTACGACCGGAGCCTTCTCCAGCGTCCACGCCCGTTGACGATGGCGTCGATATTTCCCGGCTACACGAGTCGGAATTGGGAAACGGACCAGTGCTGGTAG 702 0.567 MFAESAPRNYAHWITPFRVLTTHSTFHWDPLLATLSLSLPLYIYKPNLASSYFQQITILKRSNDTVSHSNIMIALSFPASLSASDLCGKAISSPPRRVGTRPVVAFATATATATEDRYTSTEQRRPSYLNPHGLASCGSLYDVLGIPAVASNQEIKAAYRRLARVCHPDVAAIDRKSSSADEFMKIHAAYCTLSDPEKRANYDRSLLQRPRPLTMASIFPGYTSRNWETDQCW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0743 233 SMART dnaj_3 138 198 IPR001623 -
Dere13g0743 233 CDD DnaJ 141 195 IPR001623 -
Dere13g0743 233 SUPERFAMILY Chaperone J-domain 116 202 IPR036869 -
Dere13g0743 233 Pfam DnaJ domain 140 203 IPR001623 -
Dere13g0743 233 ProSiteProfiles dnaJ domain profile. 139 206 IPR001623 -
Dere13g0743 233 PRINTS DnaJ domain signature 141 159 IPR001623 -
Dere13g0743 233 PRINTS DnaJ domain signature 159 174 IPR001623 -
Dere13g0743 233 PRINTS DnaJ domain signature 178 198 IPR001623 -
Dere13g0743 233 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 91 211 - -
Dere13g0743 233 Gene3D DnaJ domain 130 217 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0743 Dere-ChrDere13 9302987 9303688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0743 141 203 C2H2 Transcription Factor Family AT1G74250 43.284 4.25e-07 48.5