Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0741 ATGGGTATCTGCTTTTCATCCTCAAGAGTCAGTGGCTCAAACAGCAATAACACAAACGCGGGCGTCAACGCCGCCACCGTTAATCAAAATCGTAAAGAGGGTACAAAGCCGCAGTCGAGGACAACCTCGGTTAGTACACTAAAATCGAACAATCAACGACAAAAAGGATCCAGTGAGACCCAGAAGAATCAGCAAAAGAAGAATTCGCAGAAACAAAGGCCCAAAGACCACCAAATTTCCAGGCGCAAAGGTGGGCCTATTCCTTGCGGAAAGCGCACCGATTTTGGTTATGACAAAGACTTTTATGCGCAATACTCTCTCGGAAAATTGTTAGGACATGGGCAATTTGGTTATACGTTTGTTGGAATAGATAAAGAAAATGGGGATCGGGTGGCCGTGAAGAGACTTGAGAAGAGCAAGATGGTTCTCCCAATAGCTGTTGACGATGTCAAGCGGGAGGTCAAGATATTGAAACAACTTACAGGCCATGAGAATGTTGTCCAGTTTTATAATGCTTTTGAGGATGATTCATATGTATACATAGTCATGGAGTTATGTGAGGGTGGAGAACTGTTAGATCGAATATTGGCCAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCTGTAGTTGTAAGGCAAATGCTCAAAGTTGCTGCAGAGTGTCATTTACATGGCTTGGTACACAGGGACATGAAACCAGAGAATTTTCTTTTCAAATCTAGCAGAGAAGACTCTCCTCTAAAGGCTACAGATTTTGGTTTGTCGGATTTCATAAAGCCTGGAAAGAAATTTCATGATATTGTTGGCAGTGCTTACTACGTTGCACCTGAAGTGTTAAAACGTAGGTCAGGACCTGAATCAGATGTATGGAGTATTGGTGTAATTACATACATACTGCTTTGTGGGAGGCGCCCATTTTGGGATAAGACTGAGGATGGTATCTTTAAGGAGGTCTTACGCAACAAGCCTGATTTCCGCCGGAAACCATGGCCAACAATAAGTAATGCAGCAAAAGATTTTGTAAAGAAATTGCTGGTAAAGGATCCTCGGGCAAGATTGACTGCTGCTCAGGCTTTATCACATGCATGGGTTAGAGAAGGAGGAGAGGCATTGGAGATTCCTATTGATATTTCTGTTCTGAGTAACATGCGCCAGTTTGTGAAATATAGTCGACTGAAACAATTTGCACTGAGGGCATTGGCTAGCACGCTTAATGAAGAAGAGTTAGCTGATCTCAAAGATCAATTTGACGCTATAGATGTGGACAAAAATGGTTCTATTAGTCTGGAGGAGATGAGACAGGCACTTGCTAAAGATCTTCCTTGGAAGTTAAAAGAATCACGTGTATTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGGCTTGTGGATTTTTCAGAGTTTGTGGCAGCTACGTTACATGTACATCAATTGGAGGAGCATGACTCTGAGAGGTGGCAGCAACGGTCACGCTCAGCTTTTGAGAAATTTGACATAGACAAGGATGGCTATATTACACCAGAAGAACTTAGAATGCATACGGGCTTAAGAGGCTCCATTGATCCGCTGCTTGAGGAAGCTGATATTGACAAAGATGGAAAAATCAGCCTATCAGAGTTCCGTAAACTTCTAAGAACGGCAAGCATTGGTTCGGGAAATGTGCCAAGCCCCCGGAAGATCTAA 1689 0.4304 MGICFSSSRVSGSNSNNTNAGVNAATVNQNRKEGTKPQSRTTSVSTLKSNNQRQKGSSETQKNQQKKNSQKQRPKDHQISRRKGGPIPCGKRTDFGYDKDFYAQYSLGKLLGHGQFGYTFVGIDKENGDRVAVKRLEKSKMVLPIAVDDVKREVKILKQLTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSSREDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHAWVREGGEALEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAATLHVHQLEEHDSERWQQRSRSAFEKFDIDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRKLLRTASIGSGNVPSPRKI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0741 562 PANTHER SERINE/THREONINE-PROTEIN KINASE 76 539 - -
Dere13g0741 562 FunFam calcium-dependent protein kinase 28-like 191 384 - -
Dere13g0741 562 CDD STKc_CAMK 104 364 - -
Dere13g0741 562 ProSiteProfiles EF-hand calcium-binding domain profile. 525 552 IPR002048 GO:0005509
Dere13g0741 562 Gene3D Phosphorylase Kinase; domain 1 98 190 - -
Dere13g0741 562 ProSiteProfiles EF-hand calcium-binding domain profile. 487 522 IPR002048 GO:0005509
Dere13g0741 562 SUPERFAMILY EF-hand 397 548 IPR011992 -
Dere13g0741 562 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Dere13g0741 562 Gene3D - 385 545 - -
Dere13g0741 562 Pfam Protein kinase domain 105 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0741 562 ProSitePatterns EF-hand calcium-binding domain. 530 542 IPR018247 -
Dere13g0741 562 ProSitePatterns EF-hand calcium-binding domain. 500 512 IPR018247 -
Dere13g0741 562 Gene3D Transferase(Phosphotransferase) domain 1 191 384 - -
Dere13g0741 562 ProSiteProfiles Protein kinase domain profile. 105 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0741 562 SMART serkin_6 105 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0741 562 Gene3D - 406 475 - -
Dere13g0741 562 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Dere13g0741 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Dere13g0741 562 Pfam EF-hand domain pair 412 474 IPR002048 GO:0005509
Dere13g0741 562 Pfam EF-hand domain pair 493 546 IPR002048 GO:0005509
Dere13g0741 562 FunFam Calcium-dependent protein kinase 18 373 550 - -
Dere13g0741 562 MobiDBLite consensus disorder prediction 1 67 - -
Dere13g0741 562 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Dere13g0741 562 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Dere13g0741 562 FunFam CDPK-related kinase 1 98 190 - -
Dere13g0741 562 MobiDBLite consensus disorder prediction 1 90 - -
Dere13g0741 562 SMART efh_1 412 440 IPR002048 GO:0005509
Dere13g0741 562 SMART efh_1 449 477 IPR002048 GO:0005509
Dere13g0741 562 SMART efh_1 521 549 IPR002048 GO:0005509
Dere13g0741 562 SMART efh_1 491 519 IPR002048 GO:0005509
Dere13g0741 562 SUPERFAMILY Protein kinase-like (PK-like) 103 380 IPR011009 -
Dere13g0741 562 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0741 Dere-ChrDere13 9275081 9279564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0741 1 559 EF-hand Containing Proteins AT2G17890 76.021 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere13g0741 Pkinase 3.1e-68 CL0016