Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0700 ATGGCTCCAATTAGCATGAGGAAGGAGATGAGAGTGCAGAGCAAGAATCAACACTCTCAACCTCAGCAACAAGAATGGTCATCGCAGAAGCAGCCATTTCAGAGGAAAGACAACAGCAATCAAGACCAGTCCTGCAATGATGAAGACTGGATGGTCATGTTGCTCCAGAGCGATAACTCTCTAGAAAACGAAGTAATCACATTGACGCTGGATCAGTACGAGAGGCATCTGCAACAATTAAAGAAAGCAATGGAAGACGAAGGAGATGATGACAGCAAGAAAGCCAAGACCCATCATCAATTCTCGAAGCCACCTCAAGATTCTGTTTCAATGAATTTCTCACCTGTTGTTATAATTTGGGAGTTAGTAGTGTCATGTATTGGCTTCACAGAAAATGACATTTCTTCAAATGGTTTGTCCTTTCTTTCTATCTTTCCTGTTGGAAATCAATTCTTGGATGATAAAGCTTCGAAACTTGATGGTGTTTTAAGCTCGGTTTCCCTCATCATGTTCTCCAAAAACAATAAGATGCACGAATACACCACTCCTGGCCTTATGACAAAGATGATCATAGATCAGTACCAGAGGACTCTGGGGAATATCGATCTGTGGAATGCCCAACACGAGAGGATGCTTGAAAACATGAAGAACCTGAAAGAGATAAACGATAAACTCAAAAGAAAGATAAGGATGGGTGAAGACTTGGAGGGTCTGAACTTCCAGCTACTACGCAAACTTGAGGAGGATATGGATTCTGCCACGGAGATCATACGCGAACGGAAGCTGCATGTGATCAAAACTCGGACTAGTACCAGTAAGAAAAAGGTTAGAAGCATGGAGCAGGTGAACGAGAATCTCCTGCATGAATTTGAAAAGCGTGTGATCCATTCACAATATTTTGTGCAAGATGAAGGAGATCAGGAATCAGCAGTCACAGCAGGCAGAGGTGTCTCCTACTTTCAGGACCATCTGAATCTTCAGCATCATGGAATAGGGTTCAAGGCACACGATCTGCGACTTGCTTGA 1026 0.4298 MAPISMRKEMRVQSKNQHSQPQQQEWSSQKQPFQRKDNSNQDQSCNDEDWMVMLLQSDNSLENEVITLTLDQYERHLQQLKKAMEDEGDDDSKKAKTHHQFSKPPQDSVSMNFSPVVIIWELVVSCIGFTENDISSNGLSFLSIFPVGNQFLDDKASKLDGVLSSVSLIMFSKNNKMHEYTTPGLMTKMIIDQYQRTLGNIDLWNAQHERMLENMKNLKEINDKLKRKIRMGEDLEGLNFQLLRKLEEDMDSATEIIRERKLHVIKTRTSTSKKKVRSMEQVNENLLHEFEKRVIHSQYFVQDEGDQESAVTAGRGVSYFQDHLNLQHHGIGFKAHDLRLA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0700 341 Pfam K-box region 206 290 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere13g0700 341 ProSiteProfiles K-box domain profile. 208 296 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere13g0700 341 Coils Coil 201 235 - -
Dere13g0700 341 MobiDBLite consensus disorder prediction 83 107 - -
Dere13g0700 341 Coils Coil 63 90 - -
Dere13g0700 341 MobiDBLite consensus disorder prediction 1 44 - -
Dere13g0700 341 MobiDBLite consensus disorder prediction 83 101 - -
Dere13g0700 341 SUPERFAMILY SRF-like 165 219 IPR036879 GO:0003677|GO:0046983
Dere13g0700 341 MobiDBLite consensus disorder prediction 15 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0700 Dere-ChrDere13 8801440 8805329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0700 164 311 MADS-box Gene Family AT3G54340 41.060 6.91e-31 115