Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0676 ATGAAAAAGGCAGCATTATCTTTTGCCAACTGTGGCATGTTGGCCGGGGCTTCTCATCTAGTATATCATCCTGAAGAAGCTCCAGCGGTGGATTTTGCCTTTCCTCTCTCTTTTTGAACATATGGTAGTGACAAGCTTCCTAAGCACTGCGACAACAATGAGGTCCTCAAGGCTCTTTACACCGAGGTTGGTTGGATCGTTATGCCTGACGGCACCATCGAAGAGAGAGAGAAAGTAGTGGAGAGAGAAAGAGTGTATATGGCACCAACGAAGAAATAG 279 0.4624 MKKAALSFANCGMLAGASHLVYHPEEAPAVDFAFPLSFXTYGSDKLPKHCDNNEVLKALYTEVGWIVMPDGTIEEREKVVERERVYMAPTKK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0676 92 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 41 78 IPR033264 GO:0003700|GO:0006351|GO:0009742
Dere13g0676 92 Pfam BES1/BZR1 plant transcription factor, N-terminal 40 73 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0676 Dere-ChrDere13 8463138 8463743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0676 41 85 BZR Transcription Factor Family AT1G78700 59.574 7.64e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Dere13g0676 BES1_N 9.6e-13 No_clan