Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0658 ATGAACAATAAGAGCCCCGAGGCCCTACACAGGATGCATTCTTCATGTGTTCAAGAAGAAATCACATCTCCTTCGCGAACAAGACACCATAGTAAATCACCCAATTGGGTTCAAAGAGGCACTATAAGTACTAACAGAAAGCATGATCCAACATTGCAAGAAGAGGATAGAACTCCCTCGCAGTTTCCTTATGAAGGCATCGTTCAGAAACAGCAGGAACCTTACGATTTAAGGGCTCATTCAATCGGAAAAATTAACGAAATGGTAGGCCTGGCAAAACTTTCTAAAAGTCCCCAGGGTCATTATACATTAGCAGGTTGTAAAGAGTCTATTCAACCCGGGGGTATTTTCTTCTCTACTCATACGCACAAGAATATCCAAAGCACGTCATCAAGTAATGGCTCGTCTCGATCAACTGCAGTTTCCAGCTCTAATGCTATAAGAAGAAAGGACACAGGGAAACTAAATGCTAGTAGTATGAAGAGCGGCTCTAGTGGACAAATCACAGGGAACAAGAACAAAAGCCAAAAAGGGGCATTGTTTGCTTGTATGAGACAAGAGTCCTGCAAGAACCCAAAAAAATCACCAGAACGTCGAGTAATTAATGAAGCTTTTTTCATTGAGAGAGCTTTTGTAGTCGAGAGTCTCCCAAAATTCTGGGCAGATAAATACCAGCCCGTTTCACTGAATGGCTTCATATGCCACAAACAGGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGACATATTTCCTCATATTTTGCTGAAAGGTCCCCCTGGTTCTGGGAGAAGGTCACTAGCAATGGCTCTTCTGCGAGAAATATATGGTGATGAGTGCTGGAATGAAGGAAGGCCTACGAAAGTAACTGTTCCAGTAACGTCCAGTCCTCATCACGTGGAGCTAAATGTCAATTCGGAGCCGAATGCTAAATATGCTTTGATGGGGTTAGTCAAGGAAATGAGCTGTATATATGCAATGACACCAGAAGATGGCAACATTAATATCAAGTCAGATAGTAAAGTAATAGTTCTGTATGAGGTTAACAAAGCAGCAAAGGATATCCAGCACCTAATAAAAGGGATTATAGACGGCCACTCGCAAATATGCAAGCTAATACTCTGCTGCGAGGACGATGTAGACATTCTTGAATCTGTGAGAAACTTGTTCAAAGTGATTAAAGTTGATGCACCTACAACTCACGAAGCTTTCTCGTGGTGGTACACTGATGACCATACTGCTGATTCCTGTTTCGGCAGGGATAAAAAATTTGTAGCTACATCTTCTGAATACTCATATCGAAGTCCAATTTACCAGGTTACGGAGGTTCTTATAGATATAGCAGAGAATGAGGATATTCATCTATCCAAGAATTTTGCCGCTAAGATTGCTGCAAAATCAAATCAGAATCTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAACGCATACAAATGTCCATATTCCGAAGAAAAACCAATTTCAGTTGGATGGGAGGAAAGCCTTACGGAAATTGCTTCAGAGATTCTAGCTGATCCATCAAATTCACGTCTAAGCTCAGTAAGAGAGAAATTTCAGTATCTTCTCGGGGATTTTGTCCACCCAAAACTAATTCTCCAGAAACTCGTGGAAGAACTTCTGAAGAAAATCGAGCCCAGCTTAAAAAGGGAAGTCTACTACTGGCATGCTTATTATCTGCTAAATCAACGGGAAAGGAAAACTCAATATTACAGAAATGCAGAATCCAACATTCTCAATGAGGTCATCAACATTGAGAACGTTTTGCTGCAATAG 1794 0.4119 MNNKSPEALHRMHSSCVQEEITSPSRTRHHSKSPNWVQRGTISTNRKHDPTLQEEDRTPSQFPYEGIVQKQQEPYDLRAHSIGKINEMVGLAKLSKSPQGHYTLAGCKESIQPGGIFFSTHTHKNIQSTSSSNGSSRSTAVSSSNAIRRKDTGKLNASSMKSGSSGQITGNKNKSQKGALFACMRQESCKNPKKSPERRVINEAFFIERAFVVESLPKFWADKYQPVSLNGFICHKQEAQLLKELVSQDIFPHILLKGPPGSGRRSLAMALLREIYGDECWNEGRPTKVTVPVTSSPHHVELNVNSEPNAKYALMGLVKEMSCIYAMTPEDGNINIKSDSKVIVLYEVNKAAKDIQHLIKGIIDGHSQICKLILCCEDDVDILESVRNLFKVIKVDAPTTHEAFSWWYTDDHTADSCFGRDKKFVATSSEYSYRSPIYQVTEVLIDIAENEDIHLSKNFAAKIAAKSNQNLRKAIMALEACNAYKCPYSEEKPISVGWEESLTEIASEILADPSNSRLSSVREKFQYLLGDFVHPKLILQKLVEELLKKIEPSLKREVYYWHAYYLLNQRERKTQYYRNAESNILNEVINIENVLLQ 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0658 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 483 IPR027417 -
Dere13g0658 597 SUPERFAMILY post-AAA+ oligomerization domain-like 497 565 IPR008921 GO:0003677|GO:0006260
Dere13g0658 597 MobiDBLite consensus disorder prediction 1 59 - -
Dere13g0658 597 FunFam replication factor C subunit 3 437 494 - -
Dere13g0658 597 Gene3D - 218 398 IPR027417 -
Dere13g0658 597 Gene3D - 497 595 - -
Dere13g0658 597 Gene3D - 438 490 - -
Dere13g0658 597 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 217 565 - -
Dere13g0658 597 MobiDBLite consensus disorder prediction 125 173 - -
Dere13g0658 597 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0658 Dere-ChrDere13 8148670 8152329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0658 219 565 Core DNA Replication Machinery Family AT5G27740 33.241 2.26e-56 192