Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere13g0648 | ATGGCGGCCGAATCATCAGAAGGAGAAGAAGAAGCAGGGAAGCTCACGGGTGGGAACCAACTCTTAATCGTTGACGATGACCTCAGAGAGATGGGCAAGAAGGCCGCTTGGAGTGTCAGCTCCTACAAGCCCGGCAATGGCGTGTCTTCTCTTCGTGACAACAACCTTGAAACCTATTGGCAATCTGACGGAGCTCAGCCTCATTTGGTCAATATCCAATTTCAAAAGAAGGTCAAGTTACAATTAGTTGTTCTTTATGTGGATTTCAAGCTTGATGAGAGTTATACGCCAAGCAAAATTTCCATCCGTGCCGGTGATGGCTTCCATAACTTGAAGGAGATAAAAACTGTGGAGCTTGTCAAACCAACTGGTTGGTTTTATATATCATTATCTGGAACTGATCCTCGGGAAACTTTCGTCAACACTTTCATGTTGCAAATAGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTCGACCGAACCCTTTTCCGCATCAGCCGTTTCAATTTACTTCTAGAGAGTTCATCACCTACTCTTCTGTAAGATGA | 582 | 0.4485 | MAAESSEGEEEAGKLTGGNQLLIVDDDLREMGKKAAWSVSSYKPGNGVSSLRDNNLETYWQSDGAQPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGWFYISLSGTDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPFPHQPFQFTSREFITYSSVR | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere13g0648 | 193 | FunFam | Anaphase-promoting complex subunit 10 | 1 | 170 | - | - | |
| Dere13g0648 | 193 | Pfam | Anaphase-promoting complex, subunit 10 (APC10) | 20 | 190 | IPR004939 | - | |
| Dere13g0648 | 193 | PIRSF | APC10 | 3 | 193 | IPR016901 | GO:0005680|GO:0031145 | |
| Dere13g0648 | 193 | PANTHER | ANAPHASE-PROMOTING COMPLEX 10 | 20 | 193 | IPR016901 | GO:0005680|GO:0031145 | |
| Dere13g0648 | 193 | SMART | APC10_2 | 28 | 192 | IPR004939 | - | |
| Dere13g0648 | 193 | ProSiteProfiles | DOC domain profile. | 7 | 193 | IPR004939 | - | |
| Dere13g0648 | 193 | Gene3D | - | 1 | 170 | - | - | |
| Dere13g0648 | 193 | SUPERFAMILY | Galactose-binding domain-like | 22 | 169 | IPR008979 | - | |
| Dere13g0648 | 193 | CDD | APC10 | 29 | 168 | IPR016901 | GO:0005680|GO:0031145 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere04g0164 | 04 | 1654318 | 1655797 | Dere13g0648 | 13 | 8077826 | 8079695 | CCT | |
| Dere13g0648 | 13 | 8077826 | 8079695 | Dere13g0648 | 13 | 8077826 | 8079695 | ECH | |
| Dere13g0648 | 13 | 8077826 | 8079695 | Dere04g0164 | 04 | 1654318 | 1655797 | ECH |