Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0643 ATGGCATCATCTTGGACACCGAGGCAAAACAAACAATTTGAAAGGGCTCTGGCTTTATATGACAGGGAAACCCCTGATAGATGGCAGAATGTTGCCAGAGAGGTGGGAAAATCTGTGGAGGAGGTTAAAAGGCATTATGAGATCCTCAAAGAAGATGTCAAACGCATAGAGCATGGTCAAGTCCCATTTCCCCACTACAGTAATAACAACTAA 213 0.4366 MASSWTPRQNKQFERALALYDRETPDRWQNVAREVGKSVEEVKRHYEILKEDVKRIEHGQVPFPHYSNNN 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0643 70 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 68 IPR044636 GO:0003700
Dere13g0643 70 SMART sant 1 52 IPR001005 -
Dere13g0643 70 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Dere13g0643 70 FunFam Transcription factor SRM1 1 63 - -
Dere13g0643 70 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Dere13g0643 70 Gene3D - 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0643 Dere-ChrDere13 8054240 8054452 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0643 13 8054240 8054452 Dere09g0926 09 12259476 12260222 ECH
Dere06g0209 06 2917450 2918395 Dere13g0643 13 8054240 8054452 ECH
Dere13g0643 13 8054240 8054452 Dere13g0643 13 8054240 8054452 ECH
Dere09g0926 09 12259476 12260222 Dere13g0643 13 8054240 8054452 ECH