Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0630 ATGCAGCACCCAATCGACTACCTGAACAGAGAGATATCAGAAGATACATACATAGAATACACAGCAACATCAGACAAGGCTAGCTCCATGTCTGACTCACATCTGACCCTCTGTTCTATTATATCCCTCCTTCCTCTTCTTCTCATCTTCATCCTCTTCAAGAGAAAACAACCCAGGCTTAATCTCCCCCCTGGAAGAATGGGTTGGCCTTTTCTTGGTGAGACTATTGGGTATTTGAAGCCTTACTCTGCTACTACAGTTGGAGAATACATGGAGCAGCACATAGCAAGGTATGGTAAGATTTACAAGTCGAAGTTGTTTGGGGAGCCGGCTATAGTGTCAGCAGATGCAGGGCTAAACAGGTTCATATTACAGAACGAAGGGAAGTTGTTTGAATGTAGCTATCCAAGAAGCATTGGAGGAATACTAGGAAAATGGTCTATGTTAGTGTTAGTGGGTGACATGCATAGAGACATGAGGGTTATATCTCTGAACTTTCTCAGCCATGCGAGGCTACGAACACATCTGTTGAAAGAGGTCGAGAAGCATACCCTGCTTGTTCTAAGCTCCTGGAGGGAAAATTGTACATTCTCTGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCGAAGCATATTATGTCTATGGATCCTGGGAATCTTGAAACAGAGCAATTAAAGAAAGAGTATGTGACTTTCATGAAGGGGGTGGTTTCAGCGCCTTTGAATTTTCCTGGAACTGCGTATAGGAAGGCTCTAAAGTCTCGGTCCACCATTCTGAATTTCATCGAGGGGAAAATGGAAGAAAGATTGAAGAGAATCAAGGAGGGGAATGAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGAAGCATTCGAATCTTTCAACAGAGCAGATTCTTGACTTGATTCTGAGCTTGCTCTTCGCTGGACATGAAACATCATCGGTGGCCATAGCTCTTGCTATTTACTTCTTGCCTACTTGTCCTCGAGCTGTACGACAGTTAAGGGAAGAGCACAAAGAAATAGCCAAAGCCAAGAAGGAAGCAGGGGAGGTGGAATTGACTTGGGATGACTACAAAAGGATGGAATTTACTCACTGTGTTGTGAACGAGACACTTCGGCTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCCCTCAAAGATGTTCGGTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTGCCTGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATAATACTGATAATATGAATAATGGGAGTCGTGGAAGCTCATGCCCAAGTGGGAGCAGTACTACGAGCCACAACTTCATGCCGTTCGGTGGAGGACCTAGGCTATGTGCAGGATCAGAGTTGGCTAAGCTGGAAATGGCTGTTTTCATTCACCATCTCATCCTCAACTTTCAGTGGGATTTGGCTGATGAGACCGATCAAGCTTATGCCTACCCTTTTGTCGATTTTCCTAAAGGCCTACCCATCACAGTGCAACGACACTCTTTGATCTGA 1575 0.4457 MQHPIDYLNREISEDTYIEYTATSDKASSMSDSHLTLCSIISLLPLLLIFILFKRKQPRLNLPPGRMGWPFLGETIGYLKPYSATTVGEYMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWRENCTFSAQDEAKKFTFNLMAKHIMSMDPGNLETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRSTILNFIEGKMEERLKRIKEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPTCPRAVRQLREEHKEIAKAKKEAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNNTDNMNNGSRGSSCPSGSSTTSHNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNFQWDLADETDQAYAYPFVDFPKGLPITVQRHSLI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0630 524 Coils Coil 266 286 - -
Dere13g0630 524 CDD CYP90-like 94 520 - -
Dere13g0630 524 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 SUPERFAMILY Cytochrome P450 59 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 Coils Coil 339 359 - -
Dere13g0630 524 PANTHER CYTOCHROME P450 26 58 498 - -
Dere13g0630 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Dere13g0630 524 Gene3D Cytochrome P450 53 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 FunFam Cytochrome P450 90B1 52 520 - -
Dere13g0630 524 Pfam Cytochrome P450 63 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0630 524 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0630 Dere-ChrDere13 7907841 7912019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0630 54 436 Cytochrome P450 AT3G50660 76.733 0.0 644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0889 09 11783654 11787794 Dere13g0630 13 7907841 7912019 CCT
Dere13g0630 13 7907841 7912019 Dere13g0630 13 7907841 7912019 ECH