Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0617 ATGAGAGTTCCAGTTTCATCATCCCCACACACCAACCCAAAACCCACTCTCTCTAACAACAACAACACCAACACCAACCCCAACAACAACACGGCCCTAAGCATTTCCCTCCATAGCCCTACGCCTACCCACATCAATCCCACCTTGTGCTACGAACCCACTTCCGTTCTCGATCTCTGCCGGAGCCCCAGTCCCGCCACCCTTCCGGAGAAGCACACCGATCACTCCGCCGTTATCGAGTCTGTGTCAAAGCCGCCGGAGGAGTCTCTCGAGCTGGACGAGCATGTGTTCCACAATCTGGACTGGGATTCCATTATGAAGGATTTGGGTTTACATGAGGGCTCTTTGAAGGGTATTCCCCAGCCTAATCCATGTGAACCTCAGGTCCCGAATCTCCCCGAGTTCCCTCCTTCTCAGGACCCAGCACTTTTTGATCATGCATCCGCTGATTTCAGTCTCTCGGATATTTACTCGAATCAAAATCTGGGTTACAGCTTTAACGGTTTGGACCATTTGGTTTACGAGTTCAATCATAACAGCAGTTGGAACAATAATGGTTTTGATTTGATTGAAGTGCTTATCCGTGCAGCCGATTGCTTTGATTCGAACCAGCTCCATCTCGCCCAGGCGATACTGGACCGGCTCAGTCAAAGGCTACGATCTTCCGTTGGAAAGCCTCTCCAGAGGGCTGCGTTTTATTTCAAAGAAGCTCTCCAATCTCTTCTCTCCGGATCGAACCGGACTCCACGCGTTTCGTCACTGGTGGAAATCGTGCAAATCATCAAAACCTTCAAGGCTTTTGCTGGAATCTCCCCCATCCCCATGTTCTCCATCTTCACCACTAACCAAGCACTCCTTGAAGCCCTTCATGGATCTTCCTTCATGCACGTCATCGATTTCGACATCGGTCTTGGAATTCAGTACGCTTCGCTGATGAGGGAGATCGCCGAGAAGGCCGAGTCGTGCAAAATCAACGCCCCACTCCTCCGAATCACCGCCATGGTGCCAGAAGAATACACCGTCGAGTGCAAATTGATCCGAGAGAACCTGAACCAGTTCGCTCTCGAACTTAGAATCCGAGTCCAGGTCGAGTTCGTGCCATTGCGAACCTTCGAGACGATGTCGTTTAAGGCTGTCAACTTCATGGACGGAGAGAAGACCGCCGTTCTACTATCTCCAACGATCTTTCGCCGTCTAGGTTCAACAACCAACATCGCGGCGTTTTTGTCCGACGTTCGGAGGGTTTCGCCGAGTGTGGTGATATTCGTAGATGGTGAAGGGTGGACAGAGGCGTCGGCAACGACGTCGTTTCGTCGGGGAGTAGTGAATAGCCTGGAATTCTACTCGATGATGTTGGAGTCATTGGATGCTTCGGTGGCGGGGGGAGGAGGGGATTGGGTTAGAAGAATCGAGATGCTTATTCTGCGTCCACAAATCATGGCGGCGGTGGAAGGCGCCGGAAAGATGGTGTCGCCGTGGAGGGAGATGTTTTACGGTGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCTGATTTTCAAGCCGAGTGCTTGTTGGCCAAGGTTCAGATTAGAGGGTTCCAGGTGGCAAAACGACAGGCAGAGCTGGTACTCTTCTGGCAAGAGCGGGCCATGGTTGCCACGTCTGCATGGCGGTGTTAG 1662 0.5223 MRVPVSSSPHTNPKPTLSNNNNTNTNPNNNTALSISLHSPTPTHINPTLCYEPTSVLDLCRSPSPATLPEKHTDHSAVIESVSKPPEESLELDEHVFHNLDWDSIMKDLGLHEGSLKGIPQPNPCEPQVPNLPEFPPSQDPALFDHASADFSLSDIYSNQNLGYSFNGLDHLVYEFNHNSSWNNNGFDLIEVLIRAADCFDSNQLHLAQAILDRLSQRLRSSVGKPLQRAAFYFKEALQSLLSGSNRTPRVSSLVEIVQIIKTFKAFAGISPIPMFSIFTTNQALLEALHGSSFMHVIDFDIGLGIQYASLMREIAEKAESCKINAPLLRITAMVPEEYTVECKLIRENLNQFALELRIRVQVEFVPLRTFETMSFKAVNFMDGEKTAVLLSPTIFRRLGSTTNIAAFLSDVRRVSPSVVIFVDGEGWTEASATTSFRRGVVNSLEFYSMMLESLDASVAGGGGDWVRRIEMLILRPQIMAAVEGAGKMVSPWREMFYGAGMRPVQLSQFADFQAECLLAKVQIRGFQVAKRQAELVLFWQERAMVATSAWRC 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0617 553 ProSiteProfiles GRAS family profile. 180 552 IPR005202 -
Dere13g0617 553 MobiDBLite consensus disorder prediction 1 39 - -
Dere13g0617 553 Pfam GRAS domain family 189 552 IPR005202 -
Dere13g0617 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 547 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0617 Dere-ChrDere13 7755239 7756900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0617 90 552 GRAS Transcription Factor Family AT4G36710 54.825 4.65e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere13g0617 GRAS 7.9e-86 CL0063