Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0602 ATGAGTTCAAAGTTCAATGCATCTTCAATGGACATTGTAACTGAAAATAACTACAAGAACTTCACCGATTTAGCCAACCTTTCAATTTTGATCTCGATAAGACGCTTACCTGCTCTTTTTCAGCCTTACCCTTCATCTCAGAATAGCCAAACAAAGCATCTTCGAATTTTCATTGGTATATTCATCGGATTCATTCTTTTGATTGCTCTTTTAGTAGTTCTACTTTATGTTTACCGTATGAGGAAGAAAAGGGTGGGTTTAAATAGGATTGCTTTGGGTTTAGAACTAGCTGATAAGCTACTTCATGAGGTTTCTTGCTATGTTAGTAAGCCAACCATGTATGAAATTAATGTGATTATGGAAGCTACCTCGAAACTAAATGAAAGGTGCAAGATTGGGAACTCAGTCTATAGAGCTAGAATTGAAGAGCAAATTTTAGTAGTTAAAAAAGTGAAGGACCAAAATGCCAAGGAGTTAAGATTGATGCATAAGGTTAATCATGCAAATTTGGTGAACTTAAAGGGTGTCTCTTTAGACAACTATGGAAATTACTTCCTGGTTTATGAATATGTTAAAAATGGGTCTTTTGACAATTGGCTTTACCCTAGTTGTTCTTTAAGCTCTATGGCCTTTCTCACATGGAGTCAGAAGATAAGATAG 660 0.3545 MSSKFNASSMDIVTENNYKNFTDLANLSILISIRRLPALFQPYPSSQNSQTKHLRIFIGIFIGFILLIALLVVLLYVYRMRKKRVGLNRIALGLELADKLLHEVSCYVSKPTMYEINVIMEATSKLNERCKIGNSVYRARIEEQILVVKKVKDQNAKELRLMHKVNHANLVNLKGVSLDNYGNYFLVYEYVKNGSFDNWLYPSCSLSSMAFLTWSQKIR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0602 219 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 219 - -
Dere13g0602 219 Gene3D Transferase(Phosphotransferase) domain 1 107 219 - -
Dere13g0602 219 Pfam Protein tyrosine and serine/threonine kinase 152 202 IPR001245 GO:0004672|GO:0006468
Dere13g0602 219 SUPERFAMILY Protein kinase-like (PK-like) 107 210 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0602 Dere-ChrDere13 7495921 7496580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0602 112 219 Receptor kinase-like Gene Family AT2G33580 37.615 3.47e-16 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere13g0602 PK_Tyr_Ser-Thr 6.6e-07 CL0016