Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0601 ATGGACCAGGCGGAATTAAGCATAGAACAGGTTTTGAGGAGAGATATCCCATGGGAGACCTACATGTCGACTAAGCTGATCTCAGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCATCGATCGCAAAGTCACAGAGAACAGTTGCTGGATGATGATGGTCCAGCATATATACGTGTATTTGTTCATGTTTTGCGTGATATTTTTAAAGAGGAAACTGTAGAATACGTTTTGGCATTAATAGATGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTTCATGATAAGTCCCTTGCAAATGAAGATACTTATGAACCTTTCTTAAGATTGCTTTGGAAAGCGAATTGGTTCATACAAGAGAAAAGTTGTAAGATTCTTGCTTCAATAGTCAGTGTCAGGCCAAAAAGTCAAAATGGCTTTGTTACGAATGGAGAGGCATCAAACTCAAAGAAACCACTTACTACAATTGATGATGTTTTGAGAGCATTGGTGAAATGGCTTTGTGAACAGCTGAAAAAACCTTCTCATCCTAGCCGTGGTGTCCCAACTGCTATCAATTGCCTATCAACTTTACTCAAGGAACCTGTGGTTAGGTCTTCCTTTGTTCAAGTGGATGGGGTCAAGTTGCTTGTACCATTGATTTCACCAGCATCAACTCAACAGTCAATTCAGCTTCTTTATGAAACATGTCTCTGTATATGGCTCTTATCCTATTTTGAGCCTGCAATTGAATACTTGGCTACTTCAAGATCTCTTCCGCGACTTATCGATGTCATTAAGAGTTCTACAAAAGAGAAGGTAGTTAGAGTTGTTGCCTTGACTTTTAAAAACTTGCTGTTGAAAGGGACGTTGGGTGCTCAAATGGTTGACCTTCAGCTCCCACAAGTAGTTCAAAATTTGAAGGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACTTGGAAGAAGGGCTTAAGGACAACATTAAGAAACTAAGTTCTTTTGATAAGTATAAGCAAGAAGTTCTTTTTGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCATATTTTGGCGAGAAAATATTACCAGCTTTGAAGAGAATGACTTCCAGATTCTTAGAGTCCTAATAACAATTTTGGACACATCTGGTGATCCTAGGACTCTGGCTGTTGCTTGCTTTGACCTTTCACAGTTTATTAATTACCATCCTGCTGGGAGGATCATTGTGACGAACCTTAAAGCTAAGGAACGAGTAATGAAGCTAATGAATCATGAGAACGCTGAGGTTACTAAAAATGCACTGCTCTGCATCCAAAGGCTTTTCTTAGGTGCAAAGTTTGCAAGTTTCTTGCAGGCTTAG 1359 0.3996 MDQAELSIEQVLRRDIPWETYMSTKLISGTSLQLLRRYDHRSQSHREQLLDDDGPAYIRVFVHVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDKSLANEDTYEPFLRLLWKANWFIQEKSCKILASIVSVRPKSQNGFVTNGEASNSKKPLTTIDDVLRALVKWLCEQLKKPSHPSRGVPTAINCLSTLLKEPVVRSSFVQVDGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYFEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLLKGTLGAQMVDLQLPQVVQNLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSFDKYKQEVLFGNLDWSPMHKDPIFWRENITSFEENDFQILRVLITILDTSGDPRTLAVACFDLSQFINYHPAGRIIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0601 452 PIRSF V-ATP_synth_H 2 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
Dere13g0601 452 FunFam V-type proton ATPase subunit H 343 444 - -
Dere13g0601 452 Gene3D - 344 444 IPR038497 -
Dere13g0601 452 SUPERFAMILY ARM repeat 9 442 IPR016024 -
Dere13g0601 452 Gene3D - 5 331 IPR011989 -
Dere13g0601 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Dere13g0601 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
Dere13g0601 452 CDD VATPase_H 2 446 - -
Dere13g0601 452 SMART arm_5 402 442 IPR000225 GO:0005515
Dere13g0601 452 SMART arm_5 241 282 IPR000225 GO:0005515
Dere13g0601 452 SMART arm_5 195 240 IPR000225 GO:0005515
Dere13g0601 452 Pfam V-ATPase subunit H 5 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0601 Dere-ChrDere13 7479515 7485217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0601 1 452 Primary Pumps ATPases(2) AT3G42050 78.761 0.0 746