Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0597 ATGGGAATAGCAACACCGCCAGTCCTTCCATCAATTCTCTCTCACTCCACCAAGCCCCACCATTCCTTTTCTTCCATCTTAGACTCCAATTCTATGTCCCAAGATTATCACCAAGGAATCTTCACCTTCTCGAACGGGTTCGAGAGATCCACTCTAACTCACCACCAACAACAGCATCAGCAACAGCAGCAGCAGCAGCAACAGTTAGCGCAGCAGATCCGGAGGGACAAGGTGAGGGTGCAAGGAGGGTTGGACCCACCACCACCACTAGTGGGTATAGAGGAAGACGAATCTGGAAACCTTCCCGTGTATGAATCCGCAGGGATGTTATCGGAGATGTTCAATTTCCCTCCACCCGGCGCCACCGCGACTGAATTGTTGGAACAACAACAACCAACGACGGCGATGTATCGGGCCTCCAGGCCACAACCACTGGTCACTGATTGGTACGGAAACAGACAAGGGATGTTAAGTGGGTTGGGAGATTCAAAGAATCAGAATAGCCGTGACAGTAGTAGTATACTCGAGCATCATCACCCTCAGATTTCAAGCATGAATGCGGACTCAGCCGCTGCCATGCAGCTTTTTCTGATGAACCCACAAACAAGATCGCCTTCTCCTACTCATAGCCACACTCCAAATTCCACTTCTCTCCAAGGCTTCAGTACTCCAGGAGGGGGTTTCGGTCAATTCACGTGGGTTCCTCATAGCTCTCAACAAGCATCAGCCACCACTAATCCACCTCAAATTGGAGGAGGGGTTATGGAAGCCCAAGGCCTTTCCTTATCCTTATCATCTTCTTTGCAACACTTAGAAGCAGCGAAAGCCGAGGAGTTGAGGATGGGAGATGGCGGGTTTCTGTATTACAATCAAGGACCCGGAGGCTCTTCGTCTGCTCAGTATCCGTACAAGACATTGCATTTCCAAGGTTCCGTTGGAGTTGGGCAGAACCACCAGGCACATGTCGGGTTCGGGTCATCCTTAGGGGTGGTGAATGTGCTGAGGAATTCAAAGTATGTAAAGGCTGCACAAGAATTGCTTGAAGAATTCTGTAGTGTCGGGAGAGGGCAGTTCAAGAAGAACAAGTTCAGTAGGCAAAACTCAAACCCTAGTTCTAATCCTGGTGGGGGTGGTTCTTCGTCTTCATCAAAGGATCCTCCTCCTTTGTCAGCGGCTGATAGGATTGAGCATCAGCGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGACCGAAGATACAACCATTACTGCGAACAAATGCAAATGGTGGTGAACTCATTCGACATGGTGATGGGTTTCGGGTCAGCAGTGCCTTACACGGCCTTAGCTCAGAAGGCAATGTCTCGGCATTTCCGGTGCCTAAAGGATGCAATAACAGCACAGCTGAAACACAGTTGTGAGTTGCTGGGTGAGAAAGATGGAGCAGGAAGCTCAGGGATAACCAAGGGGGAGACTCCGAGGCTTAAACTGCTCGAACAAAGCCTGAGGCAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAACAGGAAGCCTGGCGACCCCAGAGAGGCCTTCCTGAACGATCCGTCAACATTTTGCGAGCCTGGCTCTTCGAGCATTTTCTCCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTCTCGAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTCCGGCTGTGGAAACCCATGATAGAAGAGATGTACCAACAAGAACTCAAAGAAGTAGAGAGTGCAGACGAGAGAGAAGAAAGGAACCAAAGCAGCAACAACAACAGCAACCTCGCACAAACTCCAACCACAGCAGCAACAACTTCAACAGCAACAGCGCCACCACCACCCACAACAACAACAACGACACCTACAACAACGCCCACATCAACAACACCAGCAGGCAAAAGATCCCATATCAATGCTTCTGAAAGCGACCCTTCACTCATTGCAATCAATACACAGCCCTTCTCGGAAACCCAACCAAACCACCCCAATTCTACCATCGCCACCGTTACCACCGCCGTTGTTGCCAACACTTCTGACGTGGCGACACCCTCGTCTCAGTGTTTCGACTCAGACCTGCCCCCACGCAGATCAATGGCTACCGACGACACGTGTCGGCACCGCAGCCTGATTGCAGCAGACTACGGGACCGCCTCTGGTAATGCTGACATTGGTTCTACTCTGATTAGGTTTGGGACCACCGCCGGTGATGTGTCTCTCACCTTAGGGCTACGCCACGCCGGGAACATCCCCGAGAAAGCTTCCCATTTCTCTGTGAGAGACTTTGGAGGCATTTAA 2328 0.509 MGIATPPVLPSILSHSTKPHHSFSSILDSNSMSQDYHQGIFTFSNGFERSTLTHHQQQHQQQQQQQQQLAQQIRRDKVRVQGGLDPPPPLVGIEEDESGNLPVYESAGMLSEMFNFPPPGATATELLEQQQPTTAMYRASRPQPLVTDWYGNRQGMLSGLGDSKNQNSRDSSSILEHHHPQISSMNADSAAAMQLFLMNPQTRSPSPTHSHTPNSTSLQGFSTPGGGFGQFTWVPHSSQQASATTNPPQIGGGVMEAQGLSLSLSSSLQHLEAAKAEELRMGDGGFLYYNQGPGGSSSAQYPYKTLHFQGSVGVGQNHQAHVGFGSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFSRQNSNPSSNPGGGGSSSSSKDPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGSSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQELKEVESADEREERNQSSNNNSNLAQTPTTAATTSTATAPPPPTTTTTTPTTTPTSTTPAGKRSHINASESDPSLIAINTQPFSETQPNHPNSTIATVTTAVVANTSDVATPSSQCFDSDLPPRRSMATDDTCRHRSLIAADYGTASGNADIGSTLIRFGTTAGDVSLTLGLRHAGNIPEKASHFSVRDFGGI 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0597 775 MobiDBLite consensus disorder prediction 156 176 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 631 654 - -
Dere13g0597 775 CDD homeodomain 514 575 IPR001356 GO:0003677
Dere13g0597 775 MobiDBLite consensus disorder prediction 51 75 - -
Dere13g0597 775 SUPERFAMILY Homeodomain-like 516 581 IPR009057 -
Dere13g0597 775 SMART prehox3 328 462 IPR006563 -
Dere13g0597 775 MobiDBLite consensus disorder prediction 10 26 - -
Dere13g0597 775 Coils Coil 577 597 - -
Dere13g0597 775 Coils Coil 52 72 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 361 395 - -
Dere13g0597 775 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 217 601 - -
Dere13g0597 775 Pfam Homeobox KN domain 531 570 IPR008422 GO:0003677|GO:0006355
Dere13g0597 775 MobiDBLite consensus disorder prediction 1 26 - -
Dere13g0597 775 SMART HOX_1 514 578 IPR001356 GO:0003677
Dere13g0597 775 FunFam BEL1-like homeodomain protein 4 517 579 - -
Dere13g0597 775 ProSiteProfiles 'Homeobox' domain profile. 511 574 IPR001356 GO:0003677
Dere13g0597 775 Gene3D - 517 579 - -
Dere13g0597 775 Pfam Associated with HOX 333 461 IPR006563 -
Dere13g0597 775 MobiDBLite consensus disorder prediction 586 654 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 361 387 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 51 74 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 200 222 - -
Dere13g0597 775 MobiDBLite consensus disorder prediction 599 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0597 Dere-ChrDere13 7396143 7402126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0597 29 561 Homeobox Transcription Factor Family AT4G36870 50.167 2.57e-144 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dere13g0597 POX 3.2e-52 No_clan