Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0584 ATGAAATGCTTGATCACCATAGCGACTGCGCTCTCACTAGTCTTCATGATCTACTCAACAAGAGCAGAATTCTGCGACCACAGGTGCGGAGAATATACCGTGCAATACCCTTTCGGGTTCTCTGAGTGCGTGATCAAATTAAACTGTAGCAACAGCCAGCACATCGAAATTGGCGGATTTCAGGTCCAGAAACTAACCTCTAGCAGTATCTTCATCAATCTTCCTGCGAAATGCAACCGAAGTATGCAATCCATCCTTCCCCTTTTCAGTGAGAACTTTGCTCCCACAAGGAACAACAGCCTTCTCCTGCAAACTTGTTCGTCTGCGGTTGGCGGCTGCGTTATACCCACCCCCAGTCTAATGGGCAATCAATTAAGGTTGGCGGATTGCGAAAGAAGTAGTGATAATATCAGTTGCTATACGGAACAGCAGACGAAGAATGCTTCAGATTTTCTGACATACGAGAATGTGATTCAAGTTCAAAGTAACTGCAAGTTCTTGTTCTCAGCGATTGCTAATGATCAAGGCAAAGACCTCGCGGTTTCCCTCCAGCTTCAGGTGCTTGAACTGGGGTGGTGGCTTGAAGGGCCATGCTCATGCTCTGACAATGCAAACTGTACGGAAGTCCATCTCGCAGACGGGAAGCTCGGTTTCCGATGCCTGTGCTCCGAAAATTACATTGGAGATGGCTACTATAACGGCGCCGGTTGCTCGATGAGTTGTGCTGTTCGCCATTGTCATGCCGCAAAACATATTTCAGGAGTTCTGGCAGGTCTTTGTGCTGTTTTTTTCTCCCTACTTGCTGCGAGTCTCCTATGTAACATCAATTTACAGCATGTGAGAAAAAAAGAACGAGAGAGAGTGGAGAGCATATTACGTGAAGCCGCAGGCAATTCTAATCTAGTGGTATACCCGTACATAGAAATAGAAAGAGCCACTAATTATTTCTCTGAGCAACGGAAGCTGGGATCGGGGGCTTTTGGTACAGTTTATGCTGGAAAACTCCACGATGAGTGGGTTGCAGTAAAAAAGATAAAACATAGAGACAACAACAACGTTGTCCAAGTCATAAATGAGATCAAGCTGCTTTCATCTAGAAGTGAGGCCTGCTATGATGGAGGTGGCAGAGGAGTTAGAATACATCAAAAGCAGTGGATGCCAGAAAATGCAGGAAACTATATAGTGCACGGCATCATCAGGTCGACCATTTCAAGTGAATCATACCATTTCCAGAATGATGAATTGGTTGGTAGTGCACACTCACACACAGCTAATACGTTCTATGACTCATACACAAACACATACATGTTTCTCAGGCAACTCACCTTCGTACTTCATGGTTCCTAG 1347 0.4529 MKCLITIATALSLVFMIYSTRAEFCDHRCGEYTVQYPFGFSECVIKLNCSNSQHIEIGGFQVQKLTSSSIFINLPAKCNRSMQSILPLFSENFAPTRNNSLLLQTCSSAVGGCVIPTPSLMGNQLRLADCERSSDNISCYTEQQTKNASDFLTYENVIQVQSNCKFLFSAIANDQGKDLAVSLQLQVLELGWWLEGPCSCSDNANCTEVHLADGKLGFRCLCSENYIGDGYYNGAGCSMSCAVRHCHAAKHISGVLAGLCAVFFSLLAASLLCNINLQHVRKKERERVESILREAAGNSNLVVYPYIEIERATNYFSEQRKLGSGAFGTVYAGKLHDEWVAVKKIKHRDNNNVVQVINEIKLLSSRSEACYDGGGRGVRIHQKQWMPENAGNYIVHGIIRSTISSESYHFQNDELVGSAHSHTANTFYDSYTNTYMFLRQLTFVLHGS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0584 448 Gene3D Phosphorylase Kinase; domain 1 301 369 - -
Dere13g0584 448 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Dere13g0584 448 ProSiteProfiles Protein kinase domain profile. 316 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0584 448 SUPERFAMILY Protein kinase-like (PK-like) 298 365 IPR011009 -
Dere13g0584 448 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 365 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0584 Dere-ChrDere13 7281353 7284930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0584 25 367 Receptor kinase-like Gene Family AT2G23450 39.944 1.67e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere13g0584 None None None