Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0583 ATGTTTGATCGCCAGAGCAAATGTGCCATTGCGCTCACACTAGTCTTCACGGTCTACTCAACCAGAGCAGAAAAGTTTGTCGTGTGTGAGAACAGGTGCGGAGAATATAGCGTGCACTACCCTTTCGGGTTCTCTAGGGGGTGCGAGATCGAATTAAACTGTAGCAACGGCCACCACATCGAAATTGGGGGATTTCAGGTCCAGAACATAACCTCTGGTAGTATCTTCGTCAATCTTCCTTCGAAGTGCAACCGAAGTATGCAATCCATCCTTCCCCTTTTCAGTGAGAACTTTGCTCCCACAAGGAACAATAGCCTTCTCCTGCAAACTTGTTCGTCTGTGTTTAAAGACGGCTGTGTTATACCCTCCATCAGTCTAATAGGCAATAAATTTAAGTTGGATAATTGTGGTAACAGTAGAGATAATATCAGTTGCTTTTCATTGCAAACAATGAATGCTCCAGACATTCTGTCATACGCGGACGTGACTGGACTTGGGTGCAAGTTCTTGTTCTCAGCGTTTGCTAATGAGCAAGGCAATGACCTGGCGGTTTCGCTTCAACTTCAGGTGCTTGAATTGGGGTGGTGGCTTGAAGGGCCATGTACATGCTCTGAATATGCAGTCTGTATAGTGGTCAATCTCGGTGGTGGGAAGTCCGGGTACCGATGCCAGTGCCCCGAAAATTACATCGGGGATGGTCACCGTAACGGAACCGGTTGCCGGCGCAATGGGGAAGGTATGGTGCTGGTTATGGCTTTATGCTTTGACCAATTAGTTTCTCGGTGCAGCGCTGCAACACTCGCGTCTGGTGCATGTGGAAAAGCAGCTAAAGTCGCTGTTCTTGTTGGAGGGATCATTGCTGTAACTTTCATCCTACTGGCTGCTGTACGTCTTTCATGTTACTTTGCCCAACGCCGTGACATTTTTTTAAGAAAACAAATGAAGATAAAGCAACTATTAAATGAAGCTACATGCAATTCTAATCTTGTTGTCTACCCGTACAAAGACATAGAAAGAGCCACTAATTTCTTCTCTGAGCAACGGAAGTTGGGATCTGGGTCTTTTGGCACAGTTTATGTGGGGAAACTCCACAATGAGTGGGTTGCAGTAAAAAAGATAAAGCAGAGTGACAACAACAGTGTTATCCAAGTCATTAATGAGATCAAGCTCCTTTCTTCTGTGAGTCACCCAAATTTAGTTCGCATCTTGGGTTGCTGGATAGATGAGAGGAAGCAGATACTTGTTCTTGAGTTTATGCCCAATGGAACACTCTCTCAGCATTTACGGAGACAAAGGGGTACAGCACTTCCATGGAAAACACGGCTCACCATTGCTACTGATACCGCCAACGCTATAGCATATCTCCATTTTGCCGTTGATCCCCCAATTTACCACAGGGACATAAAATCCAGTAATATACTCTTGGATCACAACTTCAGATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCAAGACAGACATATCACATATCTCAACCGCTCCACAAGGGACACCAGGCTATGTTGATCCTGAATACGAGCGGAATTTCCATCTCTCTGATAAAAGTGACGTCTACAGTTTTGGAGTGGTTTTGGCAGAGATAATAACTGCTATGAAAGCGGTTGATTTTTCTCGACCTCCGAATGAGATTAATTTGGCTGCACTTGCTGTTGATAGGATTGGGAGGGGTTGTGTGCAAGAGATAATGGATCCTTTCCTTTTGCAACAAGCAGATGCTTGGACAGACTACTCTGTTCACAAGGTGGTTGAGCTTGCATTTAGATGCCTGGATTCTTGTAGAGATGTGAGGCCTACTATGATGGAAGTGGCAGAAGAGCTAGAACAAATCAGATGCTGTGAATGCCAAAATATGGAGTAA 1884 0.449 MFDRQSKCAIALTLVFTVYSTRAEKFVVCENRCGEYSVHYPFGFSRGCEIELNCSNGHHIEIGGFQVQNITSGSIFVNLPSKCNRSMQSILPLFSENFAPTRNNSLLLQTCSSVFKDGCVIPSISLIGNKFKLDNCGNSRDNISCFSLQTMNAPDILSYADVTGLGCKFLFSAFANEQGNDLAVSLQLQVLELGWWLEGPCTCSEYAVCIVVNLGGGKSGYRCQCPENYIGDGHRNGTGCRRNGEGMVLVMALCFDQLVSRCSAATLASGACGKAAKVAVLVGGIIAVTFILLAAVRLSCYFAQRRDIFLRKQMKIKQLLNEATCNSNLVVYPYKDIERATNFFSEQRKLGSGSFGTVYVGKLHNEWVAVKKIKQSDNNSVIQVINEIKLLSSVSHPNLVRILGCWIDERKQILVLEFMPNGTLSQHLRRQRGTALPWKTRLTIATDTANAIAYLHFAVDPPIYHRDIKSSNILLDHNFRSKVADFGLSRLGKTDISHISTAPQGTPGYVDPEYERNFHLSDKSDVYSFGVVLAEIITAMKAVDFSRPPNEINLAALAVDRIGRGCVQEIMDPFLLQQADAWTDYSVHKVVELAFRCLDSCRDVRPTMMEVAEELEQIRCCECQNME 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0583 627 SMART serkin_6 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0583 627 FunFam Wall-associated receptor kinase-like 20 419 627 - -
Dere13g0583 627 Gene3D Phosphorylase Kinase; domain 1 305 418 - -
Dere13g0583 627 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 620 IPR044652 GO:0004672
Dere13g0583 627 Pfam Protein kinase domain 345 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0583 627 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Dere13g0583 627 ProSiteProfiles Protein kinase domain profile. 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0583 627 Gene3D Transferase(Phosphotransferase) domain 1 419 626 - -
Dere13g0583 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Dere13g0583 627 SUPERFAMILY Protein kinase-like (PK-like) 323 616 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0583 Dere-ChrDere13 7272273 7275703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0583 10 619 Receptor kinase-like Gene Family AT2G23450 49.840 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere13g0583 Pkinase 1.6e-45 CL0016