Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0582 ATGTTTTATTTCCAAAACAAAATTGCTATTGTGTTCACAATCTTCATGATCTACTCAATCAGAGCAGAAGAGTCGACCATCTGTAAGCGCAAGTGCGGTGAATATTCCGTGCAGTACCCTTTTGGGTTCTCCGGGAAGTGCGGGATCAAATTAAACTGTAGCAACCACCACATCGAAATTGGGGGATTACAGGTCCAGAAACTAACCTCTAGCAGTATCTTCATCGATCTTCCTGCGAAATGCAACCGAAGTATGCAATCCATCTACCCCCTTTTCAGTGAAAACTTTGCTCCCACAAGGAATAATAGCCTTCTCGTGCAAAGTTGTTCGTCTACGCTTGGCGGCTGCGTTATACCCATCACCAGTCTAACAGGCAATCATTTTAAGCTCAGGGGTTGCGATAAAAGTAGTGATAACATCAGTTGCACTACAGAATTGCAAACAAATAACGCTTCAGATGTTCTGGCATACGCGGACGTGACTGGAACTAAGTGCAAGTCCTTGTTCTCAGCGATTGCTATGGAGCAAGGCAAAGACCTGTCGGTTTCGCTCCAGCTTCAGGTGCTTGAATTGGGGTGGTGGCTTGAAAGCCCAAGCTCATTCCCTTGCTCTGACAATGCAAACTGTATACCGGTCCATCTCGCTGACGGGAAGCGCGGTTACCGATGCCAGTGCATTGAAGGTTACATCGGAGATGGGTTCAAGAAAGGCACCGGTTGCCGGAGAGTTTCTCATTGCAGTGCTGCAACACTCATGTCTGACGGATGTGGAAAAGCAGCTAAAATCGGTGTTCTTGTTGGAGGGGTCATTGCTGTAACTTTCTTCATAGCTGCTGTGTGTCTTCCATGTTACTTTGCTCGGCGCCGTTACACTTGTTTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTAGTGTTCCTTTCTACCCGTACAAAGAAATAGAAAGAGCCACTAATTTTTTCTGTGAGAAACAGAGACTGGGAACAGGGGCTTTTGGTACAGTGTATGCAGGAAAATTACACAATGATGAATGGGTTGCAATAAAAAAGATAAAGTATACAGACACCAATAGCGTTGACCAAGTAATGAATGAGATCAAGCTTCTTTCTTCTGTGAGTCACCCTAATTTAGTTCGCCTCTTGGGTTGCTGCATAGAGGGGGGTGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACTCTATCCCAGCATTTACAAAGAGAGAGGGGTGCAGGACTTCCGTGGACCATACGTCTCACCATTGCTGCTGAAACCGCCAATGCTATAGCATATCTCCATTCTGCCATTGACCCCCCAATTTATCACAGAGACATAAAATCCAGTAATATACTCTTGGATTACAACTTTAAATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACGTCCCATATTTCCACCGCCCCACAAGGGACTCCAGGCTACGTCGACCCTCAATATCATCAGAACTTCCATCTTTCCGATAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGTTAGAGATAATAACTGCCTTGAAAGTGGTTGATTTTTCACGACCTCAGAATGATATTAATTTGGCAGCACTTGCTGTTGATAGGATTAGAAGGGGTTGTGTGGATGAGATCATTGATCCTTTCCTCGAGCCACACAGGGATGCTTGGACACTTTACTCTGTCCACAAGGTAGCTGAGCTTGCGTTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCCGAGGAGCTAGAACACATCAGACGCAGTGGATGGGTAACAATGGAGGAAACTATATGCATGGCATCATCAGTTGGTTCCTCATGTTCATCACCTCGTATTGGAAGTGAGAAGTCATTCGGCCGTATTACTTTTAGGAAAGCAGAACGAGGGAGTGAGAGATTAATCGTTCAACAAAGGACAGATAATATTCAGCATCCTATGGAAGAGGTGAAGGATAGCTCCCCTGTATCAGTGCATGATCCTTGGTTAAGTGGACAAAGCTCACCTTCAACAAATAGCTTGTTGGGAAATGTAGTTCAGTGA 2091 0.4462 MFYFQNKIAIVFTIFMIYSIRAEESTICKRKCGEYSVQYPFGFSGKCGIKLNCSNHHIEIGGLQVQKLTSSSIFIDLPAKCNRSMQSIYPLFSENFAPTRNNSLLVQSCSSTLGGCVIPITSLTGNHFKLRGCDKSSDNISCTTELQTNNASDVLAYADVTGTKCKSLFSAIAMEQGKDLSVSLQLQVLELGWWLESPSSFPCSDNANCIPVHLADGKRGYRCQCIEGYIGDGFKKGTGCRRVSHCSAATLMSDGCGKAAKIGVLVGGVIAVTFFIAAVCLPCYFARRRYTCLRKQMTVKRLLREAAGNSSVPFYPYKEIERATNFFCEKQRLGTGAFGTVYAGKLHNDEWVAIKKIKYTDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGAGLPWTIRLTIAAETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLLEIITALKVVDFSRPQNDINLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWVTMEETICMASSVGSSCSSPRIGSEKSFGRITFRKAERGSERLIVQQRTDNIQHPMEEVKDSSPVSVHDPWLSGQSSPSTNSLLGNVVQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0582 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 682 IPR044652 GO:0004672
Dere13g0582 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Dere13g0582 696 FunFam Wall-associated receptor kinase-like 14 294 402 - -
Dere13g0582 696 MobiDBLite consensus disorder prediction 675 696 - -
Dere13g0582 696 MobiDBLite consensus disorder prediction 656 696 - -
Dere13g0582 696 Gene3D Transferase(Phosphotransferase) domain 1 403 617 - -
Dere13g0582 696 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0582 696 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Dere13g0582 696 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Dere13g0582 696 Pfam Protein tyrosine and serine/threonine kinase 330 599 IPR001245 GO:0004672|GO:0006468
Dere13g0582 696 Gene3D Laminin 201 235 - -
Dere13g0582 696 Gene3D Phosphorylase Kinase; domain 1 289 402 - -
Dere13g0582 696 FunFam Wall-associated receptor kinase-like 20 403 612 - -
Dere13g0582 696 SMART serkin_6 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0582 Dere-ChrDere13 7265462 7269410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0582 1 694 Receptor kinase-like Gene Family AT2G23450 54.752 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere13g0582 PK_Tyr_Ser-Thr 1.3e-44 CL0016