Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0578 ATGGAAACCGGAAAAGGGATGTTACCAGATGCTTGTTGTAATTCTCCATTCCTATCAGTTTTAATGGAGGATTTCTTCCCATTCTTGTCAACCTTGATCATGAGCATACTCGCCGTTCTGCTCTGCATCTTCATTTACTACTTCAAGAGATCATTTACTAATGAGGCTAAGGCCTCTAACGCACCTCAAGCAGGTGGGGCTTTGCCTATTGTTGGCCATCTCCATCGTTTTGGTAGTCACCAACTGTTCCATCAAACACTAGCTGCCATGGCCGACAAATATGGACCAGCTTTTACCATAAAGATGGGTTCAAACAGAGTCCTGATTATAAGCAGTTGGGAAATGGCCAAAGAGTGTTTCACTGTACATGATAAAGTATTTTCCACCAGACCCTCCGTTACTGCTTCAAAGCTACTAGGCTATGATTGTGCCATGTTCGGATTTGCAGCTTATGGCCCTTACTGGCGTGAGATGAGGAAGATAGCGACCATTGAGCTTCTATCAAACCATAGGCTTGACCAACTAAAACACATGAGAACTACCGAGGTGGAGATTGCAGTAAAGGAACTGTACAATTTATGGTCAAGCCAAGGTTGCCCTGAAAATGGAGTTCTCGTGGATATGAAGCAGTGGTTTGGGAATTTGTTTTTTAATGTTATTTTGAGAATGGTGGCAGGTAAGAGATATTTTGGAGCGAGCTCTGAGGACGGTGAGGCTCAGTACTGCCAGAAAGTGATTAGGGAGTTTATAAATCTATTTGGAGTGCCTGTGTTATCTGATGCAATCCCGATGCTTAGGTGGTGGGATATGAAGGGTGCTAAAAGGGAAATGAAGAAGACTGCTAATAAATTGGACCAACTCGTCGGTGAGTGGTTGGAGGAACACAAACAAAGCAGACTATTAGGTGAGCAGGCAAGGGAAGAGCAAGACTTCATGGATGTGATGCTGAGGATCTTGCAGGAAAACCCACTTCCTTTTTATGACACAGATACTATTATCAAGGCTACTAGCCTGAATCTGATAGCAGGGAGTGACTCCATAGTGGTTGCTATAACATGGGCCTTATGTCTGATACTTAATAATCCACGAGTGTTGAACAAGGCTCAAGATGAGCTAGACATCCAAATAGGGAGGGAAAGACATGTGAAAGAATCTGACATTAAGAATTTAGTCTACCTACTAGCCATTGTGAAGGAATCCTTGCGTCTCTACCCTGCAAGTGCACTCATTAATCTTCTTGCAGCGATAGAGGATTGCACACTTTCTACTGGTTATTACATTCCTGCGGGTACACAATTGATGGTGAACATATGGAAAATACACCGCGACGAGCAAGTGTGGCCAGATCCTCATAGCTTCCAACCTGAGAGATTCTTAACCAGCCATAAGGATATTGATGTGAGGGGCCAAAACTATGAGCTTCTTCCATTTGGCTCAGGAAGGAGATCATGCCCTGCTATGTCACTAGCTCTCCGGATGATGCATCTTACACTGGCTACGCTATTGCATAGTTTTGAAATTTCTACTCCGTCTAATGAACCTGTGGACATGACTCAGAGCACTGGTTTGACAAATATAAAGGCAACGCCACTAGAGGTCCTCCTTATTCCGCGCCTTAAATTCTAA 1626 0.4373 METGKGMLPDACCNSPFLSVLMEDFFPFLSTLIMSILAVLLCIFIYYFKRSFTNEAKASNAPQAGGALPIVGHLHRFGSHQLFHQTLAAMADKYGPAFTIKMGSNRVLIISSWEMAKECFTVHDKVFSTRPSVTASKLLGYDCAMFGFAAYGPYWREMRKIATIELLSNHRLDQLKHMRTTEVEIAVKELYNLWSSQGCPENGVLVDMKQWFGNLFFNVILRMVAGKRYFGASSEDGEAQYCQKVIREFINLFGVPVLSDAIPMLRWWDMKGAKREMKKTANKLDQLVGEWLEEHKQSRLLGEQAREEQDFMDVMLRILQENPLPFYDTDTIIKATSLNLIAGSDSIVVAITWALCLILNNPRVLNKAQDELDIQIGRERHVKESDIKNLVYLLAIVKESLRLYPASALINLLAAIEDCTLSTGYYIPAGTQLMVNIWKIHRDEQVWPDPHSFQPERFLTSHKDIDVRGQNYELLPFGSGRRSCPAMSLALRMMHLTLATLLHSFEISTPSNEPVDMTQSTGLTNIKATPLEVLLIPRLKF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0578 541 Coils Coil 270 290 - -
Dere13g0578 541 CDD CYP82 95 538 - -
Dere13g0578 541 SUPERFAMILY Cytochrome P450 68 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 FunFam Cytochrome P450 82C4 51 536 - -
Dere13g0578 541 Pfam Cytochrome P450 62 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Dere13g0578 541 PANTHER CYTOCHROME P450 82C3-RELATED 39 540 - -
Dere13g0578 541 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g0578 541 Gene3D Cytochrome P450 52 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0578 Dere-ChrDere13 7212243 7214145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0578 30 540 Cytochrome P450 AT4G31940 50.480 0.0 535