Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0557 ATGTCGTATTACATCATCCTGCCACTAAGAATAGTAGTGCATGAGGTGGGAGTGGGTTGCCTTAGCTCTTACCCCCATTATCAAAGAAAATGTGGAACTGAACCAAACTCAAGTGATAGGGACATGTATAGTGGCTCCACCACTCTGTATAATACTAAACTATGTGGCAGCAACTTTTTCTTCTATAAAATGCTTCCACTTTGCAACTTACTGTCACATAGCACTTGTAATAGAGTTATTAGAGAAACCCCTCTTGGCTTTCAACTTATGGAGTGTGTCTCTAACATGCATTCTTTTCTTTTCTTGTTGTGCCTAGTGTTCCTTAGTCCTCTTGTCTCCTGTCAACTTAATTATAGGTTCTATGATGCAACTTGTCCAAACCTGACCAGTATTGTTCGATACAATGTCTGGTCAGCCATGGCCAATGACACCAGAATTGCAGCTTCTCTCTTGCGTCTTCACTTCCATGACTGCTTCGTCAACGGGTGTGATGGGTCTGTGCTTCTTGACGATACCAGCACGTTTAAGGGGGAAAAGAACGCACTGCCTAACAGAAATTCAATAAGAGGATTTGAAGTAATTGACGCAATAAAATCTGCTCTAGAGAAGGCGTGTCCATCCACAGTGTCATGTGCTGACATATTAACTCTAGCAGCCAGAGAAGCTGTATATCTTAGTGGAGGCCCATTTTGGTCTGCGCCGGTTGGTCGGAGAGATGGCACAACAGCTTCTGAGAGTGAGGCTAATAATTTGCCATCACCTTTTGAGCCACTTGAAAACATTACGGCCAAGTTCATTAACAGGGGTCTTGCTATCAATGATGTAGCTGTGCTCTCAGGTGCACACACCTTTGGCTTTGCGCAGTGCTTTACGTTCAAGCCAAGGCTCTTCAACTTTGGAGGCTCAGCTGGCAAATCTGATCCAGCACTGGGCGCTTCTCTTCTTCAAACACTGCAGAAACTATGCCCCAACCAAGATGATTCTGACACCAAATTGGCTCCCTTAGATCCAGTCACCCCCAACAGATTTGACAACGTGTACTACAGAAACCTTGTGAACAGCTCAGGGTTACTTCAGTCAGATCAGGCTCTTCTGGGTGACAACAGAACTGCTTCGTTGGTGCTCAACTATAGCAAGTATCCTTTTCTGTTCTTTAGGGACTTTGCAGTGTCTATGGAGAAGATGGGGCGCATAGGAGTACTCACAGGACAGGATGGGCAAATAAGGAAAAACTGTAGGGTGGTAAACTAG 1251 0.4476 MSYYIILPLRIVVHEVGVGCLSSYPHYQRKCGTEPNSSDRDMYSGSTTLYNTKLCGSNFFFYKMLPLCNLLSHSTCNRVIRETPLGFQLMECVSNMHSFLFLLCLVFLSPLVSCQLNYRFYDATCPNLTSIVRYNVWSAMANDTRIAASLLRLHFHDCFVNGCDGSVLLDDTSTFKGEKNALPNRNSIRGFEVIDAIKSALEKACPSTVSCADILTLAAREAVYLSGGPFWSAPVGRRDGTTASESEANNLPSPFEPLENITAKFINRGLAINDVAVLSGAHTFGFAQCFTFKPRLFNFGGSAGKSDPALGASLLQTLQKLCPNQDDSDTKLAPLDPVTPNRFDNVYYRNLVNSSGLLQSDQALLGDNRTASLVLNYSKYPFLFFRDFAVSMEKMGRIGVLTGQDGQIRKNCRVVN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0557 416 ProSitePatterns Peroxidases proximal heme-ligand signature. 274 284 IPR019793 -
Dere13g0557 416 Gene3D - 119 416 - -
Dere13g0557 416 FunFam Peroxidase 119 268 - -
Dere13g0557 416 CDD secretory_peroxidase 115 415 IPR033905 GO:0004601|GO:0042744
Dere13g0557 416 Pfam Peroxidase 133 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 Gene3D Peroxidase, domain 2 252 395 - -
Dere13g0557 416 ProSitePatterns Peroxidases active site signature. 147 158 IPR019794 GO:0004601
Dere13g0557 416 ProSiteProfiles Plant heme peroxidase family profile. 115 416 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PANTHER PEROXIDASE 72-RELATED 111 415 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 SUPERFAMILY Heme-dependent peroxidases 115 416 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Haem peroxidase superfamily signature 274 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Haem peroxidase superfamily signature 336 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Haem peroxidase superfamily signature 147 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Haem peroxidase superfamily signature 227 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Haem peroxidase superfamily signature 209 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 FunFam Peroxidase 252 395 - -
Dere13g0557 416 PRINTS Plant peroxidase signature 149 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 208 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 350 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 189 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 273 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 334 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 125 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 390 403 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere13g0557 416 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0557 Dere-ChrDere13 7008744 7010305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0557 112 412 Peroxidase AT1G49570 65.789 1.55e-140 403