Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0530 ATGGTGAGCAAGTGCAGAAGAATTGCAGAGGTTGTTGCAGTAGTGGAAATGGCTCAGGTTGGGGTCAGGACAAGAGGTCGAGCAGCGTTAGCCATGGGAGGTGCTGCTGCCACAACTTCAGCTAAAAGGACACCCAAGAGAAGTAAGATCAACGACGAAGATCTCAAATTCTCTCCATCCTCATCATATGATCAGCTTAAGGGAAGAGGTCGCACTGACGTCATTCAACCGGAGGAGGAGGAGCGATGCTCTAGCCCTAATTCCGATCAACTGCCCGTGTCTTGTTGTTCGAGCAATGGATCAATCGGGCCTGATAAAGGGAGGATCGAATTCGTAGATCTGGAGGTTGATAGCACTCAAGTTGAAACATCTACGTGTAATTGCGGTGACGAAAGTAGGGAGATGAGCCCTTCAAGCGAGCTTCGAGGATCAAATTCAGAAGTGAAGCCGACGGAGGGAGGCACTCACTGTATATCAACGGCGCATAAGATGCCAACGGAGTTGGAGCTCGAAGAATTCTTTGCTGCCGCGGAGAATGACATTAAGAAACGCTTTGCAGACAAGTATAATTATGATATTGTGAAGGACGTGCCCTTAGAAGGACGTTACGAGTGGGTTCAAATAAAACCATAA 633 0.4803 MVSKCRRIAEVVAVVEMAQVGVRTRGRAALAMGGAAATTSAKRTPKRSKINDEDLKFSPSSSYDQLKGRGRTDVIQPEEEERCSSPNSDQLPVSCCSSNGSIGPDKGRIEFVDLEVDSTQVETSTCNCGDESREMSPSSELRGSNSEVKPTEGGTHCISTAHKMPTELELEEFFAAAENDIKKRFADKYNYDIVKDVPLEGRYEWVQIKP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0530 210 MobiDBLite consensus disorder prediction 32 72 - -
Dere13g0530 210 MobiDBLite consensus disorder prediction 124 155 - -
Dere13g0530 210 PIRSF CKI_KRP_plant 3 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Dere13g0530 210 Pfam Cyclin-dependent kinase inhibitor 164 208 IPR003175 GO:0004861|GO:0005634|GO:0051726
Dere13g0530 210 Gene3D p27 161 210 IPR044898 -
Dere13g0530 210 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 9 209 IPR044275 GO:0004861|GO:0045736|GO:0051726
Dere13g0530 210 MobiDBLite consensus disorder prediction 124 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0530 Dere-ChrDere13 6601025 6602212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0530 108 210 Core Cell Cycle Gene Families AT1G49620 40.909 1.46e-17 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0759 09 10385837 10387055 Dere13g0530 13 6601025 6602212 CCT
Dere09g0759 09 10385837 10387055 Dere13g0530 13 6601025 6602212 ECH
Dere13g0530 13 6601025 6602212 Dere13g0530 13 6601025 6602212 ECH