Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0507 ATGAACGACCAGCTCTCCAAACCCACTTCAATCTTTGGACTCCACTTGTGGGTAGTTCTTGGGGTATGTGTTGGAGTCGCCATCGTGCTCTTTCTCTTCCTCATCACTATCTGGCTTGCTTCGAAGCGATCCAAGAGCAAGCCATCTCATGGACCCTCAATCCCAGTTGTTTCCAAAGAGATCCAAGAGATTCGAGTCGACCATGCCCGTTCCCAGGATTCCAACCCGAATGGGTCTCATAGCCGGCCCGACCCATTCCCCGAACAGGACCCGGTTCCTGCAATTGAGCCTTCTGACGAAGAGAACCTCCTGGGGTATAACAGAATTCAATTTGAGATTGGGAAGAATCATCTAATTTCGTACCCTGAACGTGCCCTTGCTAGGTCTCCGCACACTAGTGGGGAGGCTCGACCAATTGATCAGGTGCCTACGGTGATACCTGAAGTTTCACATTTGGGTTGGGGTCACTGGTATACTCTGCGGGAGCTTGAGGATTCCACAAATGGCTTTGCCGACGAGAATGTCATCGGTGAAGGGGGCTATGGAATTGTTTACCATGGTGTATTGAAGGACAACACTCATGTTGCTATCAAGAACTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTCGAAGTGGAAGCTATAGGACGAGTACGGCATAAAAATTTAGTGAGGCTGCTCGGATATTGTGCTGAAGGAGCTCACAGAATGCTTGTGTATGAATACGTTGACAATGGGAACTTAGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGACTTGGGAAATTCGAATGAACATTATACTGGGAACAGCAAAAGGATTAGCTTACCTTCATGAGGGGTTGGAACCAAAAGTTGTTCACCGAGATATTAAATCAAGCAACATTTTGCTTGACAAGCAGTGGAATTCAAAGGTTTCAGACTTTGGCCTTGCCAAACTCCTTGGCTCTGAGAGCAGCTACATTACAACCCGTGTCATGGGTACATTTGGATATGTTGCTCCTGAATATGCATGTACTGGAATGTTGAACGAAAGGAGTGATGTGTATAGTTTTGGGATTCTTATTATGGAAGTAATTACCGGCAGGAACCCAGTTGATTATAGTCGTCCTCCAGATGAGGTGAATTTAATTGACTGGCTCAAGAAGATGGTTAGTAACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAACTTCAAGGGCACTAAAGCGAGCTCTTCTTGTAGCCTTACGCTGCACAGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATATCATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGTAGAGTTAGGAGGGATACAGGACATTCACCTAAAGATAGAGCAGATGATGGGTTGAAAGTGAAGGAGACGACCGTATCTGACGATGATCGCAGGCTTGAAAGTGGGATAGACGCTAATGAGACAAGATGA 1485 0.468 MNDQLSKPTSIFGLHLWVVLGVCVGVAIVLFLFLITIWLASKRSKSKPSHGPSIPVVSKEIQEIRVDHARSQDSNPNGSHSRPDPFPEQDPVPAIEPSDEENLLGYNRIQFEIGKNHLISYPERALARSPHTSGEARPIDQVPTVIPEVSHLGWGHWYTLRELEDSTNGFADENVIGEGGYGIVYHGVLKDNTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYACTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPDEVNLIDWLKKMVSNRNAEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHIIHMLEAEDSPYKEDRRVRRDTGHSPKDRADDGLKVKETTVSDDDRRLESGIDANETR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0507 494 Gene3D Phosphorylase Kinase; domain 1 149 245 - -
Dere13g0507 494 FunFam Putative receptor-like serine/threonine-protein kinase 246 456 - -
Dere13g0507 494 SMART serkin_6 170 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0507 494 SUPERFAMILY Protein kinase-like (PK-like) 146 442 IPR011009 -
Dere13g0507 494 PANTHER OS01G0323000 PROTEIN 1 457 - -
Dere13g0507 494 MobiDBLite consensus disorder prediction 448 494 - -
Dere13g0507 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Dere13g0507 494 ProSiteProfiles Protein kinase domain profile. 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0507 494 Pfam Protein kinase domain 171 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0507 494 MobiDBLite consensus disorder prediction 68 97 - -
Dere13g0507 494 FunFam Probable serine/threonine-protein kinase At1g01540 150 245 - -
Dere13g0507 494 CDD STKc_IRAK 176 442 - -
Dere13g0507 494 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Dere13g0507 494 Gene3D Transferase(Phosphotransferase) domain 1 246 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0507 Dere-ChrDere13 6415166 6417779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0507 147 481 Trihelix Transcription Factor Family AT1G70460 42.398 6.37e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere13g0507 Pkinase 3.1e-47 CL0016