Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0503 ATGAGAATCGGAGCAGGGCAAGAAAAAGTCTATAGCCCTTACTTCACTACCCACACTCTCACAGTTTCTCTCGCACTCTCTGTATCTCTTCTCCGCAAGAACAAACTGAAAAATGGGTGGCTTTTTTATACACTGAATTGGAGGATTGTATTGGTCGGCCTGAAAGGACGTGCATTGAATGCATATTTGGGTATTTGGAAATTTCCTTTCAGAGATTGGCCTCATTACGAAGGAAATAACAGAAAAACCCAGGTTGTTCTTGGTGTTGATAAAAATGCAAGTCAACGGGAAATTCAGAAGGCTTTCCACAACAGTTGGTGTAGAGGGGAAGCATCAAACCCAAGGCCACCAGAGATTCTAGTCTCAAAATACACAAAACAACTATGTCGGAGAATGATGATGATGTTTTGGGTTGATGACAAAGGAACAATTGTGAATATGGTAACTAGCTTCTTCACCGATTTATTCACTGAAACTGAGGAAGAGCGAGCTAACAAAACTCGAGAAGTTGTTAAGACTAGGGATCTGCACAACATATCTAAGAGAGTTATAATGACTATCGTGAAGGAAGAAGAGCAGAAAACCCAAGCTTCGGGTCATAAAGAAGTCAATCATAAGAGTCTCCTACAAAGCGACGCTCTTTATAAGTACATACTGGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTGCGAGATTTGACGGCAAAACACCCTTGGAACGCGTTCGCTGTGTCAGCTGACGAAGGACAATTCCTGAACTTACTGCTGAAACTGATAAATGCGAAGAACACCATGGAAATTGGTGTCTTCACTGGTTACTCTCTGCTCGCCACCGCCCTTGCTCTTCCAGAAGATGGAAAGATCTTGGCCATGGACGTGAACCGGGCAGATTATGAACTGGGGTTGCCTATAATTGAGAAAGCAGGCGTTGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTGTTCTTGACCAATTGCTCAAAGACGAAAAGAATGAAGAAGCATTCGATTTCATTTTCGTGGACGCTGATAAGGACAATTACTTGAACTATCACAAGAGGGTGATAGAGCTGGTGAAGGTTGGGGGATTGATTGGGTACGACAACACTCTGTGGAACGGTTCTGTTGCTGATCCACCTGATGTCCCTCAATTGGATTACATCAAATACTATCGTGACTTTGTGTTGGAGGTCAACAAGGCTCTGGCCCTCGATCCTAGGATTGAGATTTGTCAACTCGCCATTGGTGACGGCATTACCCTGTGCCGCCGCATCATCTGA 1299 0.4419 MRIGAGQEKVYSPYFTTHTLTVSLALSVSLLRKNKLKNGWLFYTLNWRIVLVGLKGRALNAYLGIWKFPFRDWPHYEGNNRKTQVVLGVDKNASQREIQKAFHNSWCRGEASNPRPPEILVSKYTKQLCRRMMMMFWVDDKGTIVNMVTSFFTDLFTETEEERANKTREVVKTRDLHNISKRVIMTIVKEEEQKTQASGHKEVNHKSLLQSDALYKYILETSVYPREHECLKELRDLTAKHPWNAFAVSADEGQFLNLLLKLINAKNTMEIGVFTGYSLLATALALPEDGKILAMDVNRADYELGLPIIEKAGVAHKIDFREGPALPVLDQLLKDEKNEEAFDFIFVDADKDNYLNYHKRVIELVKVGGLIGYDNTLWNGSVADPPDVPQLDYIKYYRDFVLEVNKALALDPRIEICQLAIGDGITLCRRII 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0503 432 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 211 430 IPR029063 -
Dere13g0503 432 PANTHER O-METHYLTRANSFERASE-RELATED 203 431 - -
Dere13g0503 432 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 207 431 IPR002935 GO:0008171
Dere13g0503 432 CDD AdoMet_MTases 273 371 - -
Dere13g0503 432 Pfam O-methyltransferase 220 431 IPR002935 GO:0008171
Dere13g0503 432 Gene3D Vaccinia Virus protein VP39 196 432 IPR029063 -
Dere13g0503 432 FunFam Caffeoyl-CoA O-methyltransferase 1 200 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0503 Dere-ChrDere13 6373480 6382518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0503 190 431 Monolignol Biosynthesis Gene Families AT4G34050 77.686 1.14e-143 409