Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0502 ATGACTATCATTAAGGAAGAAGAGCAGAAAACCCAAGCTTCGGGTCATCATAAGGAAGTCAATCATAAGAGTCTCCTGCAAAGCGATGCTCTTTATCAGTATATACTTCAAACCAGTGTTTATCCAAGAGAGCATGAGTGCTTGAAGGAGCTGCGCGAGTTAACGTCCAAACACCCTTGGAACTTGTTTGCTGTCTCTGCCGACGAAGGACAGTTCCTGAACTTGCTTCTCAAGCTGATAAACGCGAAGAACACCATGGAAATTGGTGTCTTCACTGGTTACTCTCTGCTCACCACCGCCCTTGCTCTTCCAGAAGATGGAAAGATATTGGCTATGGACGTGAACCGGGCAGATTACGAACTGGGGTTGCCTATAATTGAGAAAGCAGGCGTTGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTGTTCTTGACCAACTGCTCAAAGACGAAAAGAATATAGGGGCGTTCGATTTCATTTTCGTGGACGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTGATAGAGCTGGTGAAGGTTGGGGGATTGATAGGGTACGACAACACTCTATGGAACGGCTCTGTGGCTGACCCACCTGATGTTCCTCAATTGGACTACATCAAATATTATCGTGATTTTGTGTTGGAGCTCAACAAAGCCCTTGCTATTGATCCAAGTATTGAGATTTGTCAACTCGCTATTGGTGATGGCATTACCCTGTGCCGCCGCATCATCTGA 750 0.4587 MTIIKEEEQKTQASGHHKEVNHKSLLQSDALYQYILQTSVYPREHECLKELRELTSKHPWNLFAVSADEGQFLNLLLKLINAKNTMEIGVFTGYSLLTTALALPEDGKILAMDVNRADYELGLPIIEKAGVAHKIDFREGPALPVLDQLLKDEKNIGAFDFIFVDADKDNYLNYHKRVIELVKVGGLIGYDNTLWNGSVADPPDVPQLDYIKYYRDFVLELNKALAIDPSIEICQLAIGDGITLCRRII 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0502 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
Dere13g0502 249 Pfam O-methyltransferase 38 248 IPR002935 GO:0008171
Dere13g0502 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Dere13g0502 249 CDD AdoMet_MTases 90 188 - -
Dere13g0502 249 FunFam Caffeoyl-CoA O-methyltransferase 1 17 249 - -
Dere13g0502 249 PANTHER O-METHYLTRANSFERASE-RELATED 20 248 - -
Dere13g0502 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0502 Dere-ChrDere13 6365764 6366952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0502 7 248 Monolignol Biosynthesis Gene Families AT4G34050 78.099 7.45e-147 410