Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0499 ATGGTAGAGCAAGACACAGGTCCTACTCCTAAGGATGTATTATTGGTTATCGATTCTTTGAAAGAACAAGTTGCTGCTGAGAGGGGTATTTCCGTAAAGAAAACAATAGACGAAAGTAAAGCAAAGCTGGTTGGTGTTACTAACCATCTCTATAAATTATCAATGGAAAGAAGAACGTGCAGCAGTACCAATATGCAGAGAAGTCTGGGCCTACTGACACGGAGGCAACAAGACGCAATTGCTATGCACAATGGTATTTATGCAAGTAAAGGAGATAAAGAGAGCAATGGCTATCATGAAGATAGCCATGGTTCTACGGCAGTTCTTCTAGGTTCTAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCAGAAGTAAAAAGATTGCCTCCTTACACTACATGGACTTTCCTGGAAAGAAATCAAAGAATGACAGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAACGGCGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGATGAAGAAGATAAAAGAGAATTTGTGGAATCGGAAGATTATATTCTTTGCATGACTGTCAAAAAATTTGGTTTGTCTGATCTCGTTCTGGAATCACTGGCCCAGTGTTTTTCTAGAAGCACTTGTGATATTAAGGCTAGATATGAAGTTCTTAGACATGAAGGCAATCCTGGTGGGGATTCAAAGAATGGGGGTGCTGAAAAGAGTTCTCAAAGTGGACACTCTTTTTTGGAAAAGGATCTTGAAGCAGCCCTTGATTCTTTTGACAACCTTTTTTGTCGACGATGTCTTGATTTTGACTGCAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAACAATCTTTGTGGATGCCTCCTTATGCCGAAAATACAGCTTGTGGACCAAATTGTTTTCAATTGGTACTGAAGTCTGAAAGATTTGCCAGAGTGACCTCTTCTGTCCAGGGTGATGCAGAAGAGAAATGCTCAGGTGGTGTTGGGGTTCAAAAACCATCTAGGAAGAAGTTGTGTACTCCATCTGCTAGAAGGCGAAAGAAGTGCAGCCAAAGTGAAAGTGCTTCCTCAAATGCTAAGAACATGTCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACAGAATGCTGCTTCCGCTACCCAGTCAACACAACCTAAAACTAAACCTATGGGGAAAGGTGGAATTGGTAAGAGGAACAGTAAACGAGTTGCAGAACATGTTCTAGTTTGCATGCAGAAGAGGCAGAAGAAAACCATAGCGTCTGATTCTGATTCCCTTGGTGAAGCTCTTGATCATTCATCAAATGGGATGGTTACTGACCCCGCTGTTGTATGTGATGATGACAACCTGAGGAAAGAAGGTTTTGCAGATGAGAATATATGCAAACATGAATTCACCAATAATAAATCATGGAAAGCTCTTGAAAAAGGGCTTCTAGAGAAAGGGGTGGAAATATTTGGTAGAAACAGCTGTTTAATAGCCAGGAATCTTTTAAATGGTCTGAAGACATGTCGGGAGATTTTCCAATATTTAAATTGTGATGAGGGAAAGATGCCAGGTGCTGTTGGTGATGCTACAAATTCCCTTCTGGAAGGCTATTCCAAGGGTAACAATAAATTGAGACGAAGATCAAGATTTCTACGTAGAAGAGGAAGAGTCCGTCGCTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAATCCTTGTGGTTGCCAATCAGCTTGTGGAAAGCAATGTCCTTGTCTTCAGAATGGAACCTGCTGTGAGAAGTATTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGACGTTTGTAGGAATTGTTGGGTTGGCTGTGGCGATGGCACTCTTGGGATTCCTAGCCAAAGAGGTGATAATTATGAATGTAGAAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTGCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAACAGTGTTGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCGCATAGGGAAGCAGATAAGCGTGGCAAGATTTATGACCGTGAGAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGGAAGGGTGACAAATTGAAGTTTGCTAATCATTCCCCGGATCCAAATTGCTATGCGAAGGTTATTATGGTTGCTGGAGATCACAGGGTAGGCATTTTTGCGAAGGAACGGATTAGTGCTGGGGAGGAACTGTTTTATGATTATCGCTATGAACCAGATAGGGCTCCTGCATGGGCCCGGAAGCCTGAGGCAGCTGGATCAAAAAAAGAGGATGGTGCTCCTTCAAATGGTCGTGCAAAGAAGCTAGCTTAA 2538 0.4212 MVEQDTGPTPKDVLLVIDSLKEQVAAERGISVKKTIDESKAKLVGVTNHLYKLSMERRTCSSTNMQRSLGLLTRRQQDAIAMHNGIYASKGDKESNGYHEDSHGSTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWTFLERNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDEEDKREFVESEDYILCMTVKKFGLSDLVLESLAQCFSRSTCDIKARYEVLRHEGNPGGDSKNGGAEKSSQSGHSFLEKDLEAALDSFDNLFCRRCLDFDCRLHGCSQDLVFPAEKQSLWMPPYAENTACGPNCFQLVLKSERFARVTSSVQGDAEEKCSGGVGVQKPSRKKLCTPSARRRKKCSQSESASSNAKNMSESSDSENGPGQNAASATQSTQPKTKPMGKGGIGKRNSKRVAEHVLVCMQKRQKKTIASDSDSLGEALDHSSNGMVTDPAVVCDDDNLRKEGFADENICKHEFTNNKSWKALEKGLLEKGVEIFGRNSCLIARNLLNGLKTCREIFQYLNCDEGKMPGAVGDATNSLLEGYSKGNNKLRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEAAGSKKEDGAPSNGRAKKLA 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0499 845 Coils Coil 170 190 - -
Dere13g0499 845 ProSiteProfiles SET domain profile. 696 811 IPR001214 GO:0005515
Dere13g0499 845 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 4 843 IPR045318 GO:0006338|GO:0042054
Dere13g0499 845 FunFam Putative histone-lysine N-methyltransferase EZH2 596 813 - -
Dere13g0499 845 CDD SET_EZH 696 812 - -
Dere13g0499 845 MobiDBLite consensus disorder prediction 334 411 - -
Dere13g0499 845 SUPERFAMILY SET domain 570 816 IPR046341 -
Dere13g0499 845 SMART CXC_2 630 667 IPR033467 -
Dere13g0499 845 SMART set_7 696 817 IPR001214 GO:0005515
Dere13g0499 845 Gene3D SET domain 596 813 IPR046341 -
Dere13g0499 845 ProSiteProfiles CXC domain profile. 582 681 IPR026489 -
Dere13g0499 845 MobiDBLite consensus disorder prediction 365 401 - -
Dere13g0499 845 Pfam SET domain 707 810 IPR001214 GO:0005515
Dere13g0499 845 Pfam CXC domain 634 665 IPR041355 -
Dere13g0499 845 MobiDBLite consensus disorder prediction 821 845 - -
Dere13g0499 845 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 845 IPR025778 GO:0031519
Dere13g0499 845 MobiDBLite consensus disorder prediction 821 838 - -
Dere13g0499 845 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0499 Dere-ChrDere13 6333764 6341968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0499 685 814 C2H2 Transcription Factor Family AT2G23740 27.211 6.53e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere13g0499 SET 4.5e-11 No_clan