LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere13g0491	ATGACCATGCCTCGTTCCAAAACTCTCTTCCCTCTCTTCTTCCTTTACTTCACTCTTACCACCATCGTCTCCGATCAATCTCCGCCATCCTCTAAATTGCTCCTCTCCTCCGACGCCGTTTCGCTGCTGTCTTTCAAATCCAAAGCCGACCTCGACAACAAGCTCCTCTACGCCCTCCACGAGCGCTTCGACTACTGTGAATGGGAGGGCGTAAAATGCGCACAAGGCCGGGTGGTTCGGTTCTTCCTTCCGGGCTTTGGCCTTCGTGGCGTCTTCGCTTCCGACACCCTCACTCACCTCGGCCAGCTGCGAGTCCTCTCTCTCCGCAATAACTCCCTCTCTGGACCCATTCCCGACCTCTCTCCTCTCGTTAACCTCAAGTCTCTCTTCCTCGATCAAAATCTTTTCACAGGTTCGTTCCCTCCTTCCATTCTATTGCTTCATCGCCTCAGAACCCTTTCTCTCTCTTATAACAACCTCACCGGCTTAATTCCCGCCGAGTTAGTTACTTTGGACCATTTAGTTTCTCTCCGCCTTGATTCGAACCGGTTTAATGGAACCGTTCCGCCGTTGAACCAGTCCTTGCTTCGAATCTTCAATGTATCCGGCAATAACCTCACTGGACAAATTCCGGTGACTCCCACTCTTTCTCGATTCCACACGGCGTCTTTTTCGGGGAACCCGGGTCTCTGCGGGGAAGTTATCCTCAGAGCTTGTGATCCTCGATCTCAACTCTTCGGTTCCTCCAATTCCACTGCCTCCTTGGGGCAAAGCGCTGAATCACAGGGCAACGTCATCGTTTTTTCACCGACTATTAAAAAGCACAACAGTACCGGCCTGATTCTCGGGTTTACCATTGGGGTATCGGCTCTGATTGCTTCTTTTCTGGTGCTTATCGCGTTGGTTTGGAAACAGAGCAGTCCGAGAAGTCTAGGAAGCCCAAAATTGGCGGCATTGGAAGCCATGGATACTCCTCCAGGGAAGGAAATTGAGGGAATCGAAGAAGCTCATAAGAGTGGGAAATTGGTGTTCTCTTGTGGGGAGGTACAGTTGTATACGCTGGAGCAGTTGATGAGAGGCTCAGCGGAGTTAATGGGTAGGGGTAGCATTGGGACTACGTACAAGGCAGTGGTGGATGGGAAGCTCACTTTAACGGTAAAGAGGCTAGATGCTGGTAAGACTTCAATAACAAGTAGCCAAGTGTTCGAGCGGCACATGGAAATGGTGGGTCAGCTTCGGCATCCAAATTTGGTACCAGTTAGAGCTTATTTTCAGGCTGAGGGAGAGAGGCTGATCATCTATGATTATCAATCTAATGGAAGCCTCTTCAACCTCATTCATGGTTCGAGATCAGCAAGAGCGAAGCCTCTTCACTGGACATCATGCTTAAAGATAGCTGAAGATGTAGCTCATGGACTAACTTATATACATCATACATCAAGATTAATCCATGGCAACCTAAAGTCCTCTAATGTCCTTCTAGGAGTGGACTTTGAAGCTTGTGTTACAGACTATGGTTTGGCCCTCCTAGCAGACTCGTCATCCAGTGATGATCCTGATTCTGCAGCCTATAAACCACCTGAAACTCGCAATTCTAGCCGCCCACCCACTTCCAAGTCTGATGTCTATGCCTTCGGGGTTCTTCTTCTGGAGCTGCTGACTGCTAAATATCCTTCTCAACATCCTTTCCTTGGGCCAGTAGATTTGCAAGATTGGGTCAGAACAATGAGGGACGACGATGGTGCTGAAGATATGCAGCTAGCAATGCTCACAGAGGTCGCAAGTATTTGCAGTGCCATATCACCTGAGCAGAGACCAGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGAAGAGTGCTATGGTGGGAAGCTCTTCATCTGCTGGATTTTCGTAG	1902	0.4905	MTMPRSKTLFPLFFLYFTLTTIVSDQSPPSSKLLLSSDAVSLLSFKSKADLDNKLLYALHERFDYCEWEGVKCAQGRVVRFFLPGFGLRGVFASDTLTHLGQLRVLSLRNNSLSGPIPDLSPLVNLKSLFLDQNLFTGSFPPSILLLHRLRTLSLSYNNLTGLIPAELVTLDHLVSLRLDSNRFNGTVPPLNQSLLRIFNVSGNNLTGQIPVTPTLSRFHTASFSGNPGLCGEVILRACDPRSQLFGSSNSTASLGQSAESQGNVIVFSPTIKKHNSTGLILGFTIGVSALIASFLVLIALVWKQSSPRSLGSPKLAALEAMDTPPGKEIEGIEEAHKSGKLVFSCGEVQLYTLEQLMRGSAELMGRGSIGTTYKAVVDGKLTLTVKRLDAGKTSITSSQVFERHMEMVGQLRHPNLVPVRAYFQAEGERLIIYDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDVAHGLTYIHHTSRLIHGNLKSSNVLLGVDFEACVTDYGLALLADSSSSDDPDSAAYKPPETRNSSRPPTSKSDVYAFGVLLLELLTAKYPSQHPFLGPVDLQDWVRTMRDDDGAEDMQLAMLTEVASICSAISPEQRPAMWQVLKMIQEIKKSAMVGSSSSAGFS	633

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere13g0491	633	Gene3D	Transferase(Phosphotransferase) domain 1	438	629	-	-
	Dere13g0491	633	SUPERFAMILY	L domain-like	45	232	-	-
	Dere13g0491	633	Gene3D	Ribonuclease Inhibitor	35	192	IPR032675	-
	Dere13g0491	633	SUPERFAMILY	Protein kinase-like (PK-like)	363	619	IPR011009	-
	Dere13g0491	633	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	14	621	IPR046959	-
	Dere13g0491	633	ProSiteProfiles	Protein kinase domain profile.	359	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere13g0491	633	MobiDBLite	consensus disorder prediction	513	537	-	-
	Dere13g0491	633	FunFam	Probable inactive receptor kinase At5g67200	37	147	-	-
	Dere13g0491	633	Gene3D	Ribonuclease Inhibitor	193	243	IPR032675	-
	Dere13g0491	633	Pfam	Leucine rich repeat	125	184	IPR001611	GO:0005515
	Dere13g0491	633	MobiDBLite	consensus disorder prediction	514	537	-	-
	Dere13g0491	633	ProSiteProfiles	Leucine-rich repeat profile.	102	124	IPR001611	GO:0005515
	Dere13g0491	633	Gene3D	Phosphorylase Kinase; domain 1	336	436	-	-
	Dere13g0491	633	FunFam	Leucine-rich repeat receptor-like protein kinase	149	241	-	-
	Dere13g0491	633	Pfam	Protein kinase domain	363	561	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere13g0491	Dere-ChrDere13	6190178	6192972	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere13g0491	34	624	Receptor kinase-like Gene Family	AT3G50230	53.280	0.0	622

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Dere13g0491		Pkinase	6.6e-29	CL0016