Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0472 ATGAGCTTCCCCAGTGTTCTTCTCCATTTGCGGTGGAGATTTTCTGCGTTTCTTGTTCTTCTTATTACTGTTAGTCCATGTTTTGGCCTTAACAGAGACGGTGTTCTGTTGCTTTCTTTTAAATACTCTGTTTTGAGTGATCCTCTGTGTTTGCTCCGAAGCTGGAATCACAGCGACGAGACACCTTGTTCATGGAATGGAGTTACATGTGGAGTCATCTCTGATTCATCGAATTCTTCGCAGGGTCGAGTGGTTGCTTTGGCTCTTCCGAATTCTCAGCTTCTGGGTTCCATTCCTAAAGATCTTGGTTTGATAGAGAATCTTCATAGTCTCGACCTTTCCAATAATTCGTTGAATGGCTCTCTCCCTTCTTCGCTTTTCCAGGCTTCTGAGCTTCGGTTCCTTAATTTATCTAACAATTTGATCTCCGGGGGGGTTCCGGATTCCATAGTACAGCTTACGAATCTTCAGCTTCTTAACCTTTCTGACAATGCCTTGGCGGGAAAACTACCCACCAATCTTGGGAATATGCAGAGTCTGGCTGTCGCATCGTTGAAGAATAATTACCTGTCAGGTGGTCTTCCTAGTGGATTTCGAACGTTACAAGTTTTAGATCTGTCTTCGAACTTGCTGAATGAATCTCTACCTTCAGATTTTGGTGGGGATAGTTTGCGATATTTAAACATCTCCTTCAACAAATTTTCAGGGAAAATTCCCCCAGAATTCGCTGAGAAAATTCCGGGTAACGCTACAATTGACCTCTCCTTCAATAATCTCACCGGGGGAATTCCAGAATCCCCAGTTTTCATGAACCAAAATGGGAAGTCATTCTCTGGGAATCCTGATCTCTGCGGTGAAGAAACCAAGAACCCATGTCCTATTCCTTCTTCACCATCTCCTTCACCTAATGTCTCTTCTCCCACATCTCCTCCTGCATTCGCTGCAATCCCAAAGACACTTGATTCTCTCCCACCAGACTCGGAAAATGGGTCTTATCAGCAAGATAAGAACGGTCTTAGAAGAGGAACAGTTATAGGAATCGTAGTAGGAGACATTATAGGGATTGGAATATTGGCTTTGATTTTCTTTTACGTGTACCGACTGAAGAGAAAGAAGAACATTGAGAAAGCTCTAGAGAAGGAAGATACTGACTTGTTTCCATCACCGTCCTTGGAGTCAAGAGGGTTCAGAAGGTGGTCATGCTTGCGTAAAAAATCCGAAGAAGAAGAATCATCAGAGTCCACAAGCTCTTCTGATAGTGAAGCAGAAGTAGAAAATGGGGGTGAAAATCAGATTCAGAGGCAGCAAGAAGCTTCGCAGAACAAAACAGGCACACTGGTGACCGTTGATGGGGAAAAAGAGCTCGAGCTAGAGACACTCCTGAAGGCCTCAGCCTACATACTGGGTGCCACTGGCTCGAGCATAATGTACAAGGCTGTGCTCGAAGATGGCTCCACGTTGGCGGTTCGGAGGATCGGCGAGAACGGTGCGGAACGGTTCAAGGACTTCGAGAACCAAGTTCGGGTCATAGCCAAGTTGGTTCACCCAAACTTGGTTCGGGTTCGCGGGTTCTACTGGGGGATTGAGGAGAAGCTCATCATCTACGATTTCGTTCCTAATGGCAGCCTCGCTAATGTTCGCTACAGGAAAGTGGGTTCCTCGCCTTGCCATTTACCGTGGGAAATGAGGCTCAAGATAGCTAGAGGGGTGGCACGTGGGCTGGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAATCTAAAGCCCAGCAATATTCTCTTGGGTAACAACATGGAGCCCAAGATCGGAGACTTTGGGCTTGAGAAAATTGTAACAGGAGACGCTAGTTACAAAGCGGGAGGATCTGCTCGTATTTTCGGGAGCAAGAGATCCACGGCCTCACGAGATAGCTTCCAGGATGTCACTTTTGGGCCCAGCCCAAGCCCAAGCCCTAGCTCAATTGGAGGTGTATCACCTTACCATGCACCGGAGTCACTCAGAAACCTGAAGCCTCACCCAAAGTGGGACGTGTACTCATTTGGGGTCATATTTCTTGAGCTACTAACCGGGAAGATTGTAGTTTTGGATGAGATGGCCCAAGGGCCAGGGCTTTTGGGGGAGGATAAGAACCGGGCCTTGAGAATGGCTGATGTGGCGATCCGCGCTGACATGGAGGGTAAAGAGGAGGCCTTGTTGGCTCACTTCAAGTTAGGATATAGTTGCGTATCCAGCGTCCCACAGAAAAGGCCAACAATGAAGGAAGTGCTACATGCCCTTGATAAAATCTCATCCTCCTCTTCTTCTTCCTCGTCCTCGTATTGTTATGTTCACTAA 2334 0.4704 MSFPSVLLHLRWRFSAFLVLLITVSPCFGLNRDGVLLLSFKYSVLSDPLCLLRSWNHSDETPCSWNGVTCGVISDSSNSSQGRVVALALPNSQLLGSIPKDLGLIENLHSLDLSNNSLNGSLPSSLFQASELRFLNLSNNLISGGVPDSIVQLTNLQLLNLSDNALAGKLPTNLGNMQSLAVASLKNNYLSGGLPSGFRTLQVLDLSSNLLNESLPSDFGGDSLRYLNISFNKFSGKIPPEFAEKIPGNATIDLSFNNLTGGIPESPVFMNQNGKSFSGNPDLCGEETKNPCPIPSSPSPSPNVSSPTSPPAFAAIPKTLDSLPPDSENGSYQQDKNGLRRGTVIGIVVGDIIGIGILALIFFYVYRLKRKKNIEKALEKEDTDLFPSPSLESRGFRRWSCLRKKSEEEESSESTSSSDSEAEVENGGENQIQRQQEASQNKTGTLVTVDGEKELELETLLKASAYILGATGSSIMYKAVLEDGSTLAVRRIGENGAERFKDFENQVRVIAKLVHPNLVRVRGFYWGIEEKLIIYDFVPNGSLANVRYRKVGSSPCHLPWEMRLKIARGVARGLAYLHEKKHVHGNLKPSNILLGNNMEPKIGDFGLEKIVTGDASYKAGGSARIFGSKRSTASRDSFQDVTFGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKIVVLDEMAQGPGLLGEDKNRALRMADVAIRADMEGKEEALLAHFKLGYSCVSSVPQKRPTMKEVLHALDKISSSSSSSSSSYCYVH 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0472 777 ProSiteProfiles Protein kinase domain profile. 462 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0472 777 Pfam Leucine Rich Repeat 223 242 IPR001611 GO:0005515
Dere13g0472 777 FunFam Leucine-rich repeat receptor-like protein kinase 30 196 - -
Dere13g0472 777 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 761 - -
Dere13g0472 777 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515
Dere13g0472 777 MobiDBLite consensus disorder prediction 279 336 - -
Dere13g0472 777 FunFam Os07g0541700 protein 538 628 - -
Dere13g0472 777 MobiDBLite consensus disorder prediction 417 445 - -
Dere13g0472 777 SUPERFAMILY Protein kinase-like (PK-like) 467 762 IPR011009 -
Dere13g0472 777 CDD STKc_IRAK 468 762 - -
Dere13g0472 777 SUPERFAMILY L domain-like 33 285 - -
Dere13g0472 777 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Dere13g0472 777 MobiDBLite consensus disorder prediction 637 659 - -
Dere13g0472 777 PRINTS Leucine-rich repeat signature 153 166 - -
Dere13g0472 777 PRINTS Leucine-rich repeat signature 108 121 - -
Dere13g0472 777 FunFam Leucine-rich repeat receptor-like protein kinase 200 294 - -
Dere13g0472 777 MobiDBLite consensus disorder prediction 293 307 - -
Dere13g0472 777 Gene3D Transferase(Phosphotransferase) domain 1 538 774 - -
Dere13g0472 777 SMART LRR_typ_2 105 129 IPR003591 -
Dere13g0472 777 SMART LRR_typ_2 153 177 IPR003591 -
Dere13g0472 777 SMART LRR_typ_2 198 221 IPR003591 -
Dere13g0472 777 MobiDBLite consensus disorder prediction 403 445 - -
Dere13g0472 777 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Dere13g0472 777 MobiDBLite consensus disorder prediction 637 655 - -
Dere13g0472 777 Gene3D Ribonuclease Inhibitor 199 294 IPR032675 -
Dere13g0472 777 Pfam Protein kinase domain 468 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0472 777 ProSiteProfiles Leucine-rich repeat profile. 107 129 IPR001611 GO:0005515
Dere13g0472 777 Gene3D Phosphorylase Kinase; domain 1 426 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0472 Dere-ChrDere13 6069532 6072545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0472 14 777 Receptor kinase-like Gene Family AT4G37250 60.204 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere13g0472 Pkinase 3.7e-30 CL0016