LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere13g0465	ATGGAAGCTCTTCATATCCCCATGTTTCCTCTTCTTTTCCTTTTTCAGTTCTTCTCTCAGTCTTTCGCCGACACTGTTCCAGACAAGCATTTCATCAATTGCGGGTCGGATGTCGACGTAAACGACACTGGTCGGGTTTTCCTTGGGGATTCTCACTCTCCTTTCTCCTACTTTTCAATGAGCAGTACCGTTGTGAGGGAAAATAATAAATCGTCAACCACACCTTCTCTGTATCAAAGCGCAAGAATCTTTGACTGCCCATCATCTTACAAGTTCAGTATCGACAAAGATCATGTTGGTTATCATCTGGTACGCCTCCATTTCTTTGCTTTCTCCTCCCCAAGAAATCTCTCTAGGGCTCGATTCAATGTTTGGGTTCCTCGGTTCTTGTTGTTAGATAATTTCAGTGCCGAAAATTATACCAACTCTGCTTTAGTAAAGGAGTTTTATCTGAACATCAGTGACACTAGCTTCCAAATTGATTTTAGGCCTGTGGATATGAATTTTGCATTTGTAAACGCCATAGAACTGTTTCGACTCCCTGATAATTTTACCCGAGATGTGGCTCATCATGTTACTAGCAAAGGAAATACCATTAAATATGAGCCCATTCTCTCTAGGGTGTTACATACGAGTTATAGGCTTGAAGTTGGTGGTGGCTCTGCAATAAACGATAACTTATGGAGAAGATGGGAACATGATCAATACGCTGTAAAGGGGATTACATTATCTTCCGGGATTAAGATTAATTACATGGGAGATAATACTGACTGTGTTGGTGTGCCAGCCACTGTTTATATTGCCCCAGAATCTGTCTACCAGACAGCCAGAGTGATGAATCCAAGCAATAGCATTCAGGCCGATTCTTTCAACATATCATGGGTACTTCCTGTGAAAAGGAATACCACTTACCTCGTTCGAGCTCACTTCTGTGACATTATTAGTCAATCCACTGGTCTTATAAACTTCAATCTGTATATCTATAACAACTTCAGATGGCCAATCGACTTGGAGGAGACTTCTTTTCCTTTTTATTACGATTTTGTGGTTGATTCTGATAACTCTGGAAAATTGCGTATCAGCGTAGGCCCTGACAAAGAATCTACTATCAAAAATGCTTTCCTAAATGGTCTTGAAGTGATGGAAATCATTACCACAAAAGGTCCACCTTCAATCATAGAATCAAAGCACAATCATCTTCCTCTAGAGCTGGGAGGAGCTTTGGCGCTGATTTGCATTATAGTTGCTGGGCTCTGTTTGCTTTTGAAAGTTGGAAAACCAAAGCTCATTGAAACTCTGGATTGGTCGCCGCTGCCTCTGCAAGGACGGAGTTCCCACGGCAAATGGGGAAGCGACCGTGGTTCTTCTGTTGGTAACTTAAGTCTTGGACTCAAATTGTCTTTCCACGAAATTCAATCTGCAACACGCAATTTTGAATCAAAACGGTTAATTGGGAAGGGTGGATTTGGCAACGTCTACAAGGGAATTCTCAATAATGGCATGACAGTGGCTGTGAAAAGAAGTGAGCCAGGGTCAAGACAAGGCCTCTCAGAATTTCGAACTGAGATCATGGTCTTGTCCAGAATTCGCCATCGCCATCTTGTTTCATTAATTGGGTATTGTGATGAAATGTCTGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACACTCAGAGATCACTTATACAATTCAAATCTCCCCAGCTTGACTTGGAAGCAGAGGCTTGAAATCTGTATTGGAGCAGCGAGGGGTCTGAATTACCTTCATAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTGAAGTCCACTAACATATTGCTGGACGAAAACCTTGATGCTAAAGTTGCTGACTTTGGCCTTTCAAGAGAAGGTCCTCTTGATCAACAACCAGATGTCACCACAGATGTTAAAGGCACATTTGGGTATCTTGACCCCGAGTATTTTAAGTCCCAACAATTAACAGAAAAATCTGATGTTTACTCATTTGGGGTGGTTCTTCTCGAAGCATTATGTGCAAGATCAGCACTTGATCCAACGCTTCCAAGGGATCAAGCGAACTTGGCTGAATGGGGAATGTTTTGCAAGAGAAAAGGGACATTGGAAGAGATAATAGATCCATCGATCAAGGGACAAATAAATCCAAACTCACTAAGAAAATTTAGTGAGACAGTAGAAAAATGTGTGCTAGAAAATGGTTGTGAGAGGCCAACCATGGGTGATGTAGTGTGGGACTTGGAGTATTCACTGCAGCTTCAACGCGGTGCAGGGCAGAGAAAGCCAAATGAAGATACCTCTAGTGGTGCCACAGCATCACTTGAACTGACCATTGTTCGGCGTCTTCCTTCTCTGTCAACACTTGGCGAATCGGATGTCCTGCCAATGTTGAAGGATGACAGTGCAGCGGGTTCCGTTTTCTCGCAATTGAATATTGATGGTGCTAGATAA	2454	0.4254	MEALHIPMFPLLFLFQFFSQSFADTVPDKHFINCGSDVDVNDTGRVFLGDSHSPFSYFSMSSTVVRENNKSSTTPSLYQSARIFDCPSSYKFSIDKDHVGYHLVRLHFFAFSSPRNLSRARFNVWVPRFLLLDNFSAENYTNSALVKEFYLNISDTSFQIDFRPVDMNFAFVNAIELFRLPDNFTRDVAHHVTSKGNTIKYEPILSRVLHTSYRLEVGGGSAINDNLWRRWEHDQYAVKGITLSSGIKINYMGDNTDCVGVPATVYIAPESVYQTARVMNPSNSIQADSFNISWVLPVKRNTTYLVRAHFCDIISQSTGLINFNLYIYNNFRWPIDLEETSFPFYYDFVVDSDNSGKLRISVGPDKESTIKNAFLNGLEVMEIITTKGPPSIIESKHNHLPLELGGALALICIIVAGLCLLLKVGKPKLIETLDWSPLPLQGRSSHGKWGSDRGSSVGNLSLGLKLSFHEIQSATRNFESKRLIGKGGFGNVYKGILNNGMTVAVKRSEPGSRQGLSEFRTEIMVLSRIRHRHLVSLIGYCDEMSEMILVYEYMEKGTLRDHLYNSNLPSLTWKQRLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENLDAKVADFGLSREGPLDQQPDVTTDVKGTFGYLDPEYFKSQQLTEKSDVYSFGVVLLEALCARSALDPTLPRDQANLAEWGMFCKRKGTLEEIIDPSIKGQINPNSLRKFSETVEKCVLENGCERPTMGDVVWDLEYSLQLQRGAGQRKPNEDTSSGATASLELTIVRRLPSLSTLGESDVLPMLKDDSAAGSVFSQLNIDGAR	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere13g0465	817	PANTHER	OS07G0166700 PROTEIN	465	755	IPR045272	GO:0004714\|GO:0006468
	Dere13g0465	817	SUPERFAMILY	Protein kinase-like (PK-like)	461	749	IPR011009	-
	Dere13g0465	817	Pfam	Protein tyrosine and serine/threonine kinase	480	745	IPR001245	GO:0004672\|GO:0006468
	Dere13g0465	817	FunFam	Receptor-like protein kinase FERONIA	554	770	-	-
	Dere13g0465	817	ProSiteProfiles	Protein kinase domain profile.	478	751	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere13g0465	817	FunFam	receptor-like protein kinase FERONIA	444	553	-	-
	Dere13g0465	817	Gene3D	Phosphorylase Kinase; domain 1	453	553	-	-
	Dere13g0465	817	Gene3D	Transferase(Phosphotransferase) domain 1	554	770	-	-
	Dere13g0465	817	Gene3D	-	209	384	-	-
	Dere13g0465	817	Gene3D	-	29	180	-	-
	Dere13g0465	817	Pfam	Malectin-like domain	32	382	IPR024788	-
	Dere13g0465	817	SMART	serkin_6	478	751	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere13g0465	817	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	598	610	IPR008271	GO:0004672\|GO:0006468
	Dere13g0465	817	ProSitePatterns	Protein kinases ATP-binding region signature.	484	506	IPR017441	GO:0005524
	Dere13g0465	817	CDD	STKc_IRAK	484	749	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere13g0465	Dere-ChrDere13	5956430	5958883	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere13g0465	3	817	Receptor kinase-like Gene Family	AT2G23200	44.718	0.0	615

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Dere13g0465		Malectin_like	1.6e-24	CL0202