Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0461 ATGACTTTCTGCAGTGAGGAAGAAGTGGCAGATGAGGTATCAGTATCAATCAACAAACAAGAAGTAGAAGGTGGATCAAAAGCAATACGAGAATGGTTGAGTTTAGGACTCAACGGATCAGACACGCCTCAAAACATGGAGGGCTCTCAGATATCAAAACCATTCCAGAATAACAAGGCATTCTCATGCAATTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCTTGGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGAAGCAAGAAGGTACCAAACTCATAGGATGATTATGATGGCGGCTCGATCACTGGGTGTGCAGCCACACTCACTTGTGAACAAGCCAAGCAGAGAAGGGTCAAGTATGGTGGCTCGATTCAGTAATACCAATTATGGGTTTCAAATGGCATATTGGACGCCATTTGTGGAAGAACAAGCTATGGAGTTGAGGTGGCCAGGAAGCTTTCGGGTGGATTTGCCAAAGCAAGAATCCGATGTAAATAAGCTTGACTTAGAACTTCGGCTCTGA 534 0.4476 MTFCSEEEVADEVSVSINKQEVEGGSKAIREWLSLGLNGSDTPQNMEGSQISKPFQNNKAFSCNFCMRKFYSSQALGGHQNAHKRERGEARRYQTHRMIMMAARSLGVQPHSLVNKPSREGSSMVARFSNTNYGFQMAYWTPFVEEQAMELRWPGSFRVDLPKQESDVNKLDLELRL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0461 177 Gene3D Classic Zinc Finger 42 111 - -
Dere13g0461 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Dere13g0461 177 PANTHER ZINC FINGER PROTEIN 4-LIKE 12 177 - -
Dere13g0461 177 SUPERFAMILY beta-beta-alpha zinc fingers 57 87 IPR036236 -
Dere13g0461 177 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0461 Dere-ChrDere13 5890605 5891138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0461 26 168 C2H2 Transcription Factor Family AT1G24625 37.908 7.80e-22 86.3