Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0431 ATGACGCAATTCACACCAACACTGCCAACTTTGCACCAAATCACACCCTTTTCCAACCCTATCAGCTCCAACAACGATCATATTCCTAGGACGACAAATTCGTGGCCCAAATTCCCCACATCGAAGGCACTTGGTAGCTTGGGGGATGCTAATTGCATGGAACAATTGCTTTTTCACTGTGCCAACGCCGTCGAAACCAATGACGTCACTCTCGCCCAACAAATCCTCTGGGTTCTCAACAACATCGCACCCCACGACGGCGACGCCAATCAGCGCCTCGCATCCACCTTCCTACGCGCCCTCACCGCACGCGCCGCCAAATCTGGAAGCTCCAAGATGCTAGCCGCCGTCGCACGCGCCCACAACACCAACCTTGCTATTGACACCCACCACTTCTCCATCATCGAGCTCGCCAACTTCGTTGACGTCACCCCCTGGCATCGCTTCGGCTTCACAGCTGCTAACTCAGCCATTCTAGAAGCTACGGAAGGTTTCTCGATCATCCACATCGTTGACCTAAGCTTGACACATTGCATGCAGATTCCCACGCTTATTGACGCCATCGCTTCCCGCCACGACGTCCCTCCTCTAGTCAAGCTCACAGTAGTTGGTGCTTCTAGAAACATCCCACCGATGCTTGACCTTCCCTACGACGAACTGGGTTCAAAGCTGATCAATTTCGCAAGGTCTAAAAACGTCATCATGGAATTCAGAGTAATTTCTTCGAGTCACGCTGATGGGTTCGCGGCTTTGATCGAATACCTTCGGGTGCACCGTTTCGTGACTGAAGCTTTGGTTATAAACTGCCAGATGATGCTTCATTGTATTCCTGACGAAACCCTATCTGCAACTTCTACTACGTCCCTGAGATCAATGTTTCTTAAGGCACTACGGAGTTTGGACCCAACGCTTGTCGTTTTGGTAGACGAGGACGCGGATTTGACGTCGAGTGATTTGGTTTGCAGACTGAGGTGTGCGTTTAATTATCTGTGGATACCGTACGACACAGTGGATTCTTTTCTTCCACGAGGGAGTAAGCAGAGGCAGTGGTATGAAGCCACGATTAGCTGGAAGATTGAGAATGTGATAGCGCATGAAGGAGTTGAGAGGGTTGAGAGGCTTGAGAGTAAGAGCAGGTGGGAGCAGCGAATGAGAAATGCGGAGTTCCAAGGGATTACGTTCAGCAACGACGCCGTTTCGGAGGTGAAGGCCGTGCTGGATGAGCATGCAGCTGGGTGGAGATTGAAGAAGGATGACGAGCATCTACTGCTCACGTGGAAGGGACACAATGTCGTCTTTGCCTCAGCTTGGACACCTGCTTGA 1323 0.5125 MTQFTPTLPTLHQITPFSNPISSNNDHIPRTTNSWPKFPTSKALGSLGDANCMEQLLFHCANAVETNDVTLAQQILWVLNNIAPHDGDANQRLASTFLRALTARAAKSGSSKMLAAVARAHNTNLAIDTHHFSIIELANFVDVTPWHRFGFTAANSAILEATEGFSIIHIVDLSLTHCMQIPTLIDAIASRHDVPPLVKLTVVGASRNIPPMLDLPYDELGSKLINFARSKNVIMEFRVISSSHADGFAALIEYLRVHRFVTEALVINCQMMLHCIPDETLSATSTTSLRSMFLKALRSLDPTLVVLVDEDADLTSSDLVCRLRCAFNYLWIPYDTVDSFLPRGSKQRQWYEATISWKIENVIAHEGVERVERLESKSRWEQRMRNAEFQGITFSNDAVSEVKAVLDEHAAGWRLKKDDEHLLLTWKGHNVVFASAWTPA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0431 440 ProSiteProfiles GRAS family profile. 44 438 IPR005202 -
Dere13g0431 440 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 427 IPR005202 -
Dere13g0431 440 Pfam GRAS domain family 53 438 IPR005202 -
Dere13g0431 440 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0431 Dere-ChrDere13 5571610 5572932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0431 37 439 GRAS Transcription Factor Family AT3G49950 59.214 1.88e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere13g0431 GRAS 1.3e-97 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0431 13 5571610 5572932 Dere13g0431 13 5571610 5572932 ECH