Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0427 ATGGAGACCTCTGGCACTTCGTTTTCTTTGTCTAGCCTCTTGTGTGAAGAAGACGAAGCAAGCCTTTTGAAGGTCGATGATGAGAATTCTGGCATTGACTCGACGAACCCATGTTTTGTTTTGGAGGATGAAGAGGAATACGTTGAGAATTTGTTCAAGAGAGAAATGGGGTTTGTATCCCGCAGTGATGATTGCTCAAGCATTGGTAGTAAATGGCTCAAGAGTGCTCGAGGGGATGCCATTGACTGGATTTTCAACACGGGGGCGAAATTTGGGTTCAAATTTCACACCGTTTATCTATCAGTGACTTACTTCGATCGTTTTCTTTCAAGAAGATCCATTGATGAAGGGAAACATTGGGCTATTCAATTATTATCGATGGCATGTTTATCTTTGGCAGCGAAGATGGAAGAGCAAAACGTACCGCCTCTATCCGAATTTCCAGCAGAAGAATATTGCTTTGAGAATAAAGTGATTAGGAAAATGGAATTACTAATTTTGGATTCCTTGGGATGGAAAATGGGATCAGTGACTCCTTTTGCTTATCTGCAGTACTTCTTCAAGAAATTCTGTTTGGAATCAAAACCAGAAGTAATAATCTCAAGAGCTGTAGAATACATTATGGCCATCGTTAAAGATGTTAATTTAATAGATCAACGGCCATCTGTTATTGCTTCGGCTGCCATATTGGCTGCTTTTGATGCTACATTAACAAGACACACCATGGATCTTCGTATAAGCGTGATCTCCTGGGGATCTCAAGAAAGTGAACTTGTATTTTCCTGTTACAATCTAATGCAGGAAATAGAGAGAAGAAAAGTTAAGACTCCTGATTCAAATTTATTGTCAACCCCTTCCAGCTCCGCAGGTGTTCCAGAGAATCCCTCTCTTCTTTCTTCTGTTACCAAGAGAAAACTCACTTTCGTAGACGAAAACTGCCCTGAACAAAAGATTCATCGGCCTTAG 966 0.4058 METSGTSFSLSSLLCEEDEASLLKVDDENSGIDSTNPCFVLEDEEEYVENLFKREMGFVSRSDDCSSIGSKWLKSARGDAIDWIFNTGAKFGFKFHTVYLSVTYFDRFLSRRSIDEGKHWAIQLLSMACLSLAAKMEEQNVPPLSEFPAEEYCFENKVIRKMELLILDSLGWKMGSVTPFAYLQYFFKKFCLESKPEVIISRAVEYIMAIVKDVNLIDQRPSVIASAAILAAFDATLTRHTMDLRISVISWGSQESELVFSCYNLMQEIERRKVKTPDSNLLSTPSSSAGVPENPSLLSSVTKRKLTFVDENCPEQKIHRP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0427 321 Gene3D - 61 175 - -
Dere13g0427 321 SMART Cyclin_C_2 177 301 IPR004367 -
Dere13g0427 321 CDD CYCLIN_AtCycD-like_rpt2 177 266 - -
Dere13g0427 321 FunFam Cyclin-D5-1 72 175 - -
Dere13g0427 321 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Dere13g0427 321 PANTHER CYCLINS 44 273 IPR039361 -
Dere13g0427 321 Pfam Cyclin, C-terminal domain 177 273 IPR004367 -
Dere13g0427 321 CDD CYCLIN_AtCycD-like_rpt1 76 172 - -
Dere13g0427 321 MobiDBLite consensus disorder prediction 278 298 - -
Dere13g0427 321 SUPERFAMILY Cyclin-like 36 174 IPR036915 -
Dere13g0427 321 Gene3D - 49 241 - -
Dere13g0427 321 SMART cyclin_7 82 168 IPR013763 -
Dere13g0427 321 Pfam Cyclin, N-terminal domain 48 174 IPR006671 -
Dere13g0427 321 MobiDBLite consensus disorder prediction 276 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0427 Dere-ChrDere13 5485503 5486861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0427 9 251 Core Cell Cycle Gene Families AT4G37630 37.743 1.26e-46 157