Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0426 ATGATGCAGAGAGAAAATGGAGGGAAAAAGAGGGGCCACAGTGAGAAGCTAAAGAGAAGAAAAATTGATGAAAATGCAGAATGGGGTGGGGAAAATCATACAGTGGAGCATAAAGTGATGGCTAAGATAGATAGCAATGATTGTAAATCTGTGAGAAATGCCCAGAAAGTGATTCCAGTACCATCATCTCCTTTGCGTGATACAGCACCAAGAAAGTGGAGCTATGTGTCTAGAGCAACAAGAGATATGTGGGAACGTCTTTTCGATGAAGGTTATAGAGCAGATGTTTGCATTCATACTCATAATGGTGGCATCGTTTTTGCTCATTCTAACATAATTGGCATGGCTTCTCCTGTATTGAGAGGCATGCTAAAGCAGGCAAGTCGTCATCGTGGTCGGCGATCAATCTCTATTCCTGGGGTTCCTTATTATGCAGTCCGCGTTTTTATTCGATTCTTGTATTCTTCCTGTTATGAGAAAGAAGAGATGGAGGAATTCGTCTTGCATTTGTTGGTGCTGTCGCATGCATTTGCTGTGCCTCACTTGAAGCGTGAATGTGAAGAGAAGCTAGAGACAGGTTTACTCACAACAAACAATGCCGTTGACGTATTTCAGCTTGCATTGCTGTGTGATGCTCCACGGCTCAGTCTCATTTGTCACAGAATGATCTCAAAGAATCTGAAACCTGTTTTGGAGTCTGGAGGGTGGAAAGCCATGAAGCAGAGTCACCCCATTCTAGAAAAGGAACTTCTGGAGTCTATAACCATAGAAGAAAATAAGAAGAAGAAGAGCATGAGAAAAAGTGACGAAAGGAAGATGTACATGGAACTATACGAGGCAATGGAAGCACTTGTTCACATATGCAGAGACGGGTGTCGAACAATTGGTCCACACGACAAAGACTTGAAAATAAACGAGGCTCCTTGTGGTTATGCAGCATGCAAGAGGCTAGAATTGCTTGTTCGTCATTTTGCTGCCTGCAAGCTGAGGGTCCCAGGTGGGTGCGTTCATTGCAAAAGGATGTGGCAATTACTGGAGTTGCATTCTCGACTCTGTGCTCATCCAGATTTCTGTAAAGTTCCTTTATGCAGCAACTTCAAGCAAAAAATATCGAATCAAAGCAAGAAAGACGAGATAAAGTGGAAGATACTGGTTGAAAAGATTCTAAGAACAAAGGGCATTGCTGTGGCACCAATTTTTCCACGGCAATAG 1212 0.429 MMQRENGGKKRGHSEKLKRRKIDENAEWGGENHTVEHKVMAKIDSNDCKSVRNAQKVIPVPSSPLRDTAPRKWSYVSRATRDMWERLFDEGYRADVCIHTHNGGIVFAHSNIIGMASPVLRGMLKQASRHRGRRSISIPGVPYYAVRVFIRFLYSSCYEKEEMEEFVLHLLVLSHAFAVPHLKRECEEKLETGLLTTNNAVDVFQLALLCDAPRLSLICHRMISKNLKPVLESGGWKAMKQSHPILEKELLESITIEENKKKKSMRKSDERKMYMELYEAMEALVHICRDGCRTIGPHDKDLKINEAPCGYAACKRLELLVRHFAACKLRVPGGCVHCKRMWQLLELHSRLCAHPDFCKVPLCSNFKQKISNQSKKDEIKWKILVEKILRTKGIAVAPIFPRQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0426 403 Pfam TAZ zinc finger 278 363 IPR000197 -
Dere13g0426 403 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 68 396 IPR044513 -
Dere13g0426 403 Gene3D TAZ domain 268 391 IPR035898 -
Dere13g0426 403 SMART BTB_4 94 194 IPR000210 GO:0005515
Dere13g0426 403 MobiDBLite consensus disorder prediction 1 29 - -
Dere13g0426 403 Gene3D Potassium Channel Kv1.1; Chain A 68 195 IPR011333 -
Dere13g0426 403 SMART TAZ_2 271 364 IPR000197 -
Dere13g0426 403 Pfam BTB/POZ domain 86 192 IPR000210 GO:0005515
Dere13g0426 403 Gene3D - 196 267 - -
Dere13g0426 403 FunFam BTB/POZ and TAZ domain-containing protein 2 268 393 - -
Dere13g0426 403 ProSiteProfiles BTB domain profile. 94 162 IPR000210 GO:0005515
Dere13g0426 403 SUPERFAMILY POZ domain 70 192 IPR011333 -
Dere13g0426 403 FunFam BTB/POZ and TAZ domain-containing protein 2 196 266 - -
Dere13g0426 403 SUPERFAMILY TAZ domain 271 371 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0426 Dere-ChrDere13 5473076 5482116 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dere13g0426 BTB 4.4e-11 CL0033