Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0414 ATGGATACCCTGTTTCGGCTAGTCAGTTTTCAAACCCAACCAGATCGTCAATCCCTCAACTCCACGAGCAGATCTTCTAGCAGCTCCAGATCCTCCAGACAAAACAACAACTACCATCACTACCAGCAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCGTCTTCTTCTAAGCACTACTATCCTTATCACCCCCACCCTTCCACCACCACCACCCCCACCCCCACCACTCTCATCCCTAACACTACCATCACCACAACGACCCCCACCACTTCTGATTTCTCTTTCTCAGTCTCGCCCACTACGCGTGACCTCAATGACTTCGAATTCTCTGGCAAGTGGGCTCAAGACATCCTCTTGGAAACCGCGCGTGCCATGGCCGACAAGAACAGCGCGCGTGTCCAGCAAATGATGTGGATGCTCAATGAACTCGCCAGTCCTTATGGCGACACCGACCAGAAGCTCGCCGCCTACTTCCTCCAGGCCTTGTTCAGTCGCGTCACCGACTCCGGCGACCGAACCTACCGTACCTTAGCCTCCGCGTCCGAGAAAACATGCTCTTTCGAGTCAACCAGGAAGACGGTCTTGAAGTTCCAAGAAGTCAGCCCATGGACTACCTTCGGTCACGTCGCTTCCAATGGCGCCATCTTGGAGGCCTTAGAAGGTGAGCCAAAGTTACATATAATTGACATTAGCGATACCTATTGCACCCAATGGCCTACCCTTCTCGAGGCCTTGGCCACTCGCAGCGATGACACCCCGCACCTGAGGTTAACCACCGTGGTGACCCGCCGAGCCGGCAGCTCCGTCGCAGCGGTTCAAAAAGTCATGAAGGAGATAGGGACTAGAATGGAGAAATTCGCTCGACTCATGGGTGTTCCTTTTAAATTCAACGTCATTCATCACGCGGGTGATCTCTCAGACCTTAGTTTCTCCGACTTAGAAATTAGAGATGACGAGGCTCTAGCGATTAATTGTGTGAACGCGTTGCATTCGATCACAGCCGCTGGTAGTAACCGTGACATGTTGATATCCTCGTTTCGGAGATTACAACCTAGGATAGTCACTGTGGTGGAAGAGGAAGCTGATCTTGATGTCGGGTTTCATGGGTTTGAATTTGTACGAGGTTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCATTGGAGGAAAGCTTCCCACGCGCAAGCAACGAGCGGTTGATGCTCGAGCGATCGGCGGGAAGAGCCATCGTTGATTTGGTGGCTTGTGAGCCGTCGCAGTCGGTGGAGAGGCGGGAGACGGCGGCGCGTTGGTCACAGCGGCTGCATGGCGGTGGGTTCAACACGGCACCGTTTAGCGACGAGGTTTGCGACGACGTAAGAGCGCTGTTGAGGAGGTACCCGGAGGGGTGGGCAATAACACAGTGCTCCGATGCCGGAATATTCTTGGCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1503 0.5343 MDTLFRLVSFQTQPDRQSLNSTSRSSSSSRSSRQNNNYHHYQQEDEECFNFFMDEEDLSSSSSKHYYPYHPHPSTTTTPTPTTLIPNTTITTTTPTTSDFSFSVSPTTRDLNDFEFSGKWAQDILLETARAMADKNSARVQQMMWMLNELASPYGDTDQKLAAYFLQALFSRVTDSGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIIDISDTYCTQWPTLLEALATRSDDTPHLRLTTVVTRRAGSSVAAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSDLSFSDLEIRDDEALAINCVNALHSITAAGSNRDMLISSFRRLQPRIVTVVEEEADLDVGFHGFEFVRGFQECLRWFRVYFEALEESFPRASNERLMLERSAGRAIVDLVACEPSQSVERRETAARWSQRLHGGGFNTAPFSDEVCDDVRALLRRYPEGWAITQCSDAGIFLAWKDQPVVWASAWRP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0414 500 MobiDBLite consensus disorder prediction 10 37 - -
Dere13g0414 500 MobiDBLite consensus disorder prediction 62 83 - -
Dere13g0414 500 Pfam GRAS domain family 123 499 IPR005202 -
Dere13g0414 500 ProSiteProfiles GRAS family profile. 112 499 IPR005202 -
Dere13g0414 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0414 Dere-ChrDere13 5331200 5332702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0414 1 500 GRAS Transcription Factor Family AT4G37650 62.594 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere13g0414 GRAS 7e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0414 13 5331200 5332702 Dere13g0414 13 5331200 5332702 ECH