Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0403 ATGTCTGTCTCCTGCGACCACCTAACTCTCGACTTGTACTGCGATGAAGCAGCTAGCGAGGTGGTTTCATCGGACTCCAATGCTACTAACTACGAGTCGAGTCAGATGCGGGAAAAACAAGAGTCACTGGCACAGCTTCGAGAAAAAGCATGGCTCAGAGCTGCTCGAGAAGAAGCCATAAATTGGATACTAAAGGTGCAAGCTTACTACAGTTTTAGACCAGAGACGGCTTGTCTTTCTGTGAACTATCTTGATCGTTTTCTTTTGTCACACTCATTGCCGATGATGGAGCCCAGGTTTGTGTTCAAGCCTAAAACAGTTCAAAGGATGGAGCTTTTGGTCATGGCTACTCTCAGGTGGCGATTGCGAGCTGTTACTCCATTTGATTTTGTTCACCTTTTCATGGCCAAGGCTAAGCTATCATGCTCTGCTCCCAGACATATTATATCTCGTGTCTCAGATGTTATTATCAGAACATTAATGGATTTCTTAGAGTATCGTCCATCCACAATAGCAGCAGCTGCTCTTTTATGGGCAACCCATCAATATGTTGATGACCAGAACTTTAACTTCTTCCACGAAAATATAAGCACAGATATGGTGCAGAAATGTTATAAGCTCATGAAGCAGAGGATTTTCCAGTCAGAACATTTTGTAACGAAGAATGTACAGTCATTGCCCCCAAGTCCTACTTGTGTGCTTGATCATGCTGCTATGCAAGAAAGTAACAAGGATCACAAGCCTCGCTGA 750 0.4373 MSVSCDHLTLDLYCDEAASEVVSSDSNATNYESSQMREKQESLAQLREKAWLRAAREEAINWILKVQAYYSFRPETACLSVNYLDRFLLSHSLPMMEPRFVFKPKTVQRMELLVMATLRWRLRAVTPFDFVHLFMAKAKLSCSAPRHIISRVSDVIIRTLMDFLEYRPSTIAAAALLWATHQYVDDQNFNFFHENISTDMVQKCYKLMKQRIFQSEHFVTKNVQSLPPSPTCVLDHAAMQESNKDHKPR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0403 249 SUPERFAMILY Cyclin-like 107 213 IPR036915 -
Dere13g0403 249 SMART Cyclin_C_2 125 229 IPR004367 -
Dere13g0403 249 ProSitePatterns Cyclins signature. 56 87 IPR006671 -
Dere13g0403 249 Pfam Cyclin, C-terminal domain 125 216 IPR004367 -
Dere13g0403 249 CDD CYCLIN_AtCycD-like_rpt2 125 208 - -
Dere13g0403 249 Gene3D - 43 101 - -
Dere13g0403 249 SUPERFAMILY Cyclin-like 47 122 IPR036915 -
Dere13g0403 249 Gene3D - 104 225 - -
Dere13g0403 249 Pfam Cyclin, N-terminal domain 35 96 IPR006671 -
Dere13g0403 249 PANTHER CYCLINS 34 214 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0403 Dere-ChrDere13 5250135 5251417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0403 1 223 Core Cell Cycle Gene Families AT1G70210 31.095 7.02e-36 128