Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0388 ATGTTGTCAGCTCTTCCACCTTCCGACCCTTTGCTCAATAACCCATTCTGGGCCTTAGACGGCGGTTTCACTCCCTGGGATTGCCCGAGCCCAAGCTCGGGCTCAGGCCTAGGCCCGAACCTTCTCTCCTCCTTCAAGCCTAACAAATCCCAAACCCATGCGAAACCCAAGCCCGTGGGCTCGGACGTCGACGTGAAGCGTGTGGCATCCATTGTGGACGAGCGGAAACGGAGGAGAATGATATCGAACCGGGAGTCGGCGCGGCGGTCGCGGTTGCGTAAACAGAAGCATCTAGAGAATTTACGGTTGCAGGTGAACCGGCTCGGGATCCTGAACAGGGAACTGAACAACAGGTTGCAGTTTCTTCTGCATCACTGTAACCGCGTGAGGACGGAGAACGATTGGCTCCGGTCCGAGCAAACCCGGCTCAGACAAAGACTATACTATATAACTCAAATTTTGGTTCACCAGCAGCCCTTCTCGTCTGCATGGCCATGCAATACTACTATTTTCACGACAGAATAA 525 0.539 MLSALPPSDPLLNNPFWALDGGFTPWDCPSPSSGSGLGPNLLSSFKPNKSQTHAKPKPVGSDVDVKRVASIVDERKRRRMISNRESARRSRLRKQKHLENLRLQVNRLGILNRELNNRLQFLLHHCNRVRTENDWLRSEQTRLRQRLYYITQILVHQQPFSSAWPCNTTIFTTE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0388 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Dere13g0388 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Dere13g0388 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Dere13g0388 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Dere13g0388 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 49 157 - -
Dere13g0388 174 MobiDBLite consensus disorder prediction 30 61 - -
Dere13g0388 174 Pfam bZIP transcription factor 75 133 IPR004827 GO:0003700|GO:0006355
Dere13g0388 174 Coils Coil 98 118 - -
Dere13g0388 174 FunFam BZIP transcription factor 73 124 - -
Dere13g0388 174 SUPERFAMILY Leucine zipper domain 75 126 IPR046347 GO:0003700|GO:0006355
Dere13g0388 174 Gene3D - 73 127 - -
Dere13g0388 174 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0388 Dere-ChrDere13 5097676 5098200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0388 1 158 bZIP Transcription Factor Family AT3G49760 39.024 2.06e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere13g0388 bZIP_1 2e-09 CL0018