Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0357 ATGGTTGCTAAAAAGCAGACTAAAGCCGTTGCCACTATTTCCTTGTTTTCGCTTAGATCACCAGATTTTGGACATGCGTTCGGAAATGAGAGACCAAGGAAGCCTTCGCGCCTCGCTGTCCGGCTCGTCGTCCTTACTCAGAAACTCTCAACTATATCTTCACCCCTACACGTCACACACTGCATTGCAGGCAGCCTCCTCCTCTGTCGGAGCTCTGCAACAACCCGAACCCAAAAAATGAGGCTTTTCCTCTTGCTTCTTCTCCTTCTCCTTCTGCACCACTCCCTCTCTGCTGCTCCAATGTCTGAGTACCGTGCCCTCCTTTCTCTCAAAGCAGCCATTACCGACGACCCCCATTCTTCTCTTTCCTCCTGGAACGCCTCCACCAGCCACTGCACCTGGTTTGGCGTGTCCTGCGACTCCCGCCGCCACGTCACCGCTCTTAACCTAACTGGCCTTGGCCTCTCTGGTACACTCTCCAACGATATTGCTCACCTTCCATTTCTTTCTAATCTCTCTGTCGCTGATAATCAGCTCTCTGGACCCATTCCCCCCGGAATTTCTGTCGTCACCAGCCTCCGATCCCTCAACCTTTCTAACAATGTGTTTAATGGCACTTTCCCTGCCGACCTCTCGCAGCTCAAGAATCTTCAGGTCCTCGACCTTTATAACAACAATATGACCGGAGAACTCCCGCTCGTCGTGACCCAGATGCCGAATCTCCGGCATTTGCATCTCGGTGGGAACTTCTTCGCGGGTCGGCTCCCGCCGGAGTATGGACAGTGGGAACACTTGGAATACTTGGCTATATCCGGTAATGAGCTTGACGGCACAATACCGCCAGAGATCGGAAACTTGACAAAGCTCCGGGAGCTTTATATCGGATATTACAACGTTTACGAGGGCGGTATACCGCCCGAGATTGGCAACTTGTCAGAATTAGTAAGGTTGGACGCTGCAAACTGTGGGTTAACCGGCGAGATACCGCCGGAAGTCGGGAAACTTCAGAAACTTGATACCTTGTTTCTTCAAGTGAATGCGCTTTCAGGGTCTCTGACGCGTGAACTTGGGAACTTGAAGAGTTTGAAATCAATGGATTTGTCCAACAATATGCTTTCGGGTGAGATCCCGGATAGTTTTGCTGAGCTCAAGAACCTGACGCTTTTGAACCTGTTCAGGAACAAGCTTAACGGAGCCATTCCTGAGTTCATTGGTGAACTACCTTCCTTGGAGGTTTTACAGCTTTGGGAGAATAACTTCACTGGGAGCATACCTCAGAGCTTGGGGCAGAATGGGAGGCTTGTGCTTGTTGATCTTTCGTCAAACAAGTTGACTGGTACTTTGCCTCCTGATTTGTGCAATGGGAATCGCCTTCAGACTTTAATAACCCTTGCAAATTTCCTATTTGGTCCTATCCCTGAATCGCTCGGGAGGTGCGAGTCATTAACACGAATTCGTATGGGAGAGAACTATCTGAATGGGTCAATACCGAAAGGCCTTTTTGGGCTTCCGAAACTCACACAAGTTGAACTTCAGGATAATTATCTCTCAGGGCAATTTCCTGAGGCGGCTTCCATTTCTGTTAATCTTGGTCAGATCAGTCTATCCAACAACAAGCTCTCTGGTCCGTTGCCGCCGTCAATAGGCAACTTTTCCGGCATGCAGAAGCTCCTTCTTGATAGCAACAAGTTCTCAGGTCTAATACCTCCTGAAATTGGGAGGTTACAGCAGCTTTCAAAGATAGATTTTAGCCACAACAACTTCTCTGGCCCTATCGCGCAAGAAATCAGTCAATGCAAGCTATTAACGTTCGTTGATCTTAGTCGTAATGAACTTTCTGGTGATATTCCAAATGAAATCACCGGTATGCGGATACTGAATTACTTGAATCTCTCCAGAAATCATCTCGTCGGTAGCATTCCCGCATCAATATCAAGTATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCCGGCACTGGCCAATTCAGTTACTTCAACTACACATCTTTCCTGGGTAACTCGGAACTCTGTGGTCCATATTTGGGTCCTTGCAAGGACGGTGTTGCCGATGGCGCTCACCCGCCTCATGTTAAAGGTCCATTGTCTGCTTCTTTGAAGCTTCTGTTGGTGATTGGATTGCTTTTATGTTCGATTGCATTTGCAGTTGCTGCAATAATTAAAGCAAGATCATTGAAGAAGGCGAGTGAAGCTCGTGCATGGAAATTAACAGCATTCCAGCGCTTGGACTTCACTGCGGACGATGTTTTGGATTGCTTGAAGGAGGACAATATAATAGGTAAAGGAGGTGCTGGCATTGTGTACAAGGGTGCAATGCCTAATGGGGATCAGGTTGCTGTTAAAAGGCTACCAGCTATGAGCAGAGGCTCTTCCCATGATCATGGTTTCAATGCAGAGATCCAGACATTAGGGAGAATCCGACACAGACACATTGTTCGGTTGTTGGGTTTCTGTTCAAACCATGAAACTAATCTTTTGGTGTATGAATACATGCCAAATGGAAGCTTGGGTGAAGTTCTTCATGGTAAGAAAGGGGGACATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGGCTTTGCTATCTACACCATGACTGTTCACCTCTTATTGTTCATCGAGATGTAAAATCGAACAATATCCTTCTTGACTCCAATTTCGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCCGGCTCATATGGATACATAGCTCCAGAATATGCCTACACACTGAAAGTGGATGAGAAAAGCGATGTGTACAGTTTTGGTGTGGTTCTTTTAGAGCTTATAACGGGCCGGAAACCAGTTGGAGAATTTGGCGATGGAGTGGACATTGTGCAGTGGGTGAGGAAATTGACAGACTCAAACAAGGAAGGAGTTCTAAAAGTACTTGATCCTCGACTTCCCTCTCTGCCTCTTCATGAAGTGATGCACGTGTTCTATGTAGCCATGCTCTGTGTTGAAGAACAGGCAGTAGAGCGACCAACTATGCGTGAAGTTGTTCAAATTCTAACTGAGCTTCCAAAGCCACCTGCTTCAAAGCCGGGAGACTTGACAATTACAGAGTCGTCTCTGTCATCATCAAACGCTCTAGATTCTCCAACCACAGGGAAAGAACTCAAAGATCATCAGCATCCTCCTCAGTCGCCACCACCGGATCTTCTTAGCATTTGA 3276 0.4692 MVAKKQTKAVATISLFSLRSPDFGHAFGNERPRKPSRLAVRLVVLTQKLSTISSPLHVTHCIAGSLLLCRSSATTRTQKMRLFLLLLLLLLLHHSLSAAPMSEYRALLSLKAAITDDPHSSLSSWNASTSHCTWFGVSCDSRRHVTALNLTGLGLSGTLSNDIAHLPFLSNLSVADNQLSGPIPPGISVVTSLRSLNLSNNVFNGTFPADLSQLKNLQVLDLYNNNMTGELPLVVTQMPNLRHLHLGGNFFAGRLPPEYGQWEHLEYLAISGNELDGTIPPEIGNLTKLRELYIGYYNVYEGGIPPEIGNLSELVRLDAANCGLTGEIPPEVGKLQKLDTLFLQVNALSGSLTRELGNLKSLKSMDLSNNMLSGEIPDSFAELKNLTLLNLFRNKLNGAIPEFIGELPSLEVLQLWENNFTGSIPQSLGQNGRLVLVDLSSNKLTGTLPPDLCNGNRLQTLITLANFLFGPIPESLGRCESLTRIRMGENYLNGSIPKGLFGLPKLTQVELQDNYLSGQFPEAASISVNLGQISLSNNKLSGPLPPSIGNFSGMQKLLLDSNKFSGLIPPEIGRLQQLSKIDFSHNNFSGPIAQEISQCKLLTFVDLSRNELSGDIPNEITGMRILNYLNLSRNHLVGSIPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNSELCGPYLGPCKDGVADGAHPPHVKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKLTDSNKEGVLKVLDPRLPSLPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPASKPGDLTITESSLSSSNALDSPTTGKELKDHQHPPQSPPPDLLSI 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0357 1091 Pfam Leucine rich repeat N-terminal domain 102 140 IPR013210 -
Dere13g0357 1091 ProSiteProfiles Protein kinase domain profile. 767 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0357 1091 MobiDBLite consensus disorder prediction 1042 1091 - -
Dere13g0357 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 845 1054 - -
Dere13g0357 1091 Pfam Protein tyrosine and serine/threonine kinase 769 1038 IPR001245 GO:0004672|GO:0006468
Dere13g0357 1091 Gene3D Transferase(Phosphotransferase) domain 1 845 1049 - -
Dere13g0357 1091 SMART serkin_6 767 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0357 1091 Pfam Leucine Rich Repeat 361 383 IPR001611 GO:0005515
Dere13g0357 1091 SUPERFAMILY L domain-like 432 692 - -
Dere13g0357 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 736 844 - -
Dere13g0357 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 411 696 - -
Dere13g0357 1091 Gene3D Ribonuclease Inhibitor 100 298 IPR032675 -
Dere13g0357 1091 Gene3D Ribonuclease Inhibitor 451 693 IPR032675 -
Dere13g0357 1091 Pfam Leucine Rich repeats (2 copies) 215 251 IPR025875 -
Dere13g0357 1091 SMART LRR_typ_2 238 262 IPR003591 -
Dere13g0357 1091 SMART LRR_typ_2 432 455 IPR003591 -
Dere13g0357 1091 SMART LRR_typ_2 190 214 IPR003591 -
Dere13g0357 1091 SMART LRR_typ_2 647 670 IPR003591 -
Dere13g0357 1091 SMART LRR_typ_2 359 382 IPR003591 -
Dere13g0357 1091 SMART LRR_typ_2 407 431 IPR003591 -
Dere13g0357 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 160 403 - -
Dere13g0357 1091 Gene3D Phosphorylase Kinase; domain 1 734 844 - -
Dere13g0357 1091 Gene3D Ribonuclease Inhibitor 299 450 IPR032675 -
Dere13g0357 1091 SUPERFAMILY Protein kinase-like (PK-like) 763 1038 IPR011009 -
Dere13g0357 1091 MobiDBLite consensus disorder prediction 1051 1069 - -
Dere13g0357 1091 SUPERFAMILY RNI-like 148 462 - -
Dere13g0357 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Dere13g0357 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 304 1040 - -
Dere13g0357 1091 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 97 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0357 Dere-ChrDere13 4811344 4816442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0357 92 1068 Receptor kinase-like Gene Family AT5G65700 82.030 0.0 1631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere13g0357 PK_Tyr_Ser-Thr 3.7e-46 CL0016