Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0354 ATGGGTGTTAAAGCTTGCCAATATGATGCATTTGAGATTGGTTTTATAACCCCTGATGACTTTACAAATGTAGATATTTTGGAAGCAACTTATCCAGCTGTTGCAAGGAGGTTATATAGTAATTGGGTTTCTAACCCTACAATACCAATTGTAATAGGCTTCCTTGGAATGGGTCGGAAATCATGTGCAGTAACGACACTGGGTAAAGGGGGTAGTGATTTGACGACTACAACAATGGGTAAAGCGCTAGCATTGCCTGAAATCTATATTTACATGGTGAAAGAACAGAGCCAAGGACAAAGAAGAAGATTCGATGGAGTGAAGAGTGTAGATACGAACGTGAAGCTAAAGTTGCATTTGACAGTTGCAGAAGCACAAGTTGAAGCAAGGGTCTCAGACAAGAATGTGTTGATTCGAATCCAATGCCAGAAACATAAAGGACTGTTGGTGAAGATAATCAGAGAGATAGAAAGGCTTCGTTTGTCAGTGGTAAATAGCAGTGTGATGCCATTCGGGAGATCCATTCTGATCATAACCATCATAGCTGAGATGGAGGAAGAGTTCGAGTTAAGCGCGGAGGAGCTAGCAAGGAGTGGGAGGGTGGCACTGTTTATGCAATTAATGTAA 627 0.4163 MGVKACQYDAFEIGFITPDDFTNVDILEATYPAVARRLYSNWVSNPTIPIVIGFLGMGRKSCAVTTLGKGGSDLTTTTMGKALALPEIYIYMVKEQSQGQRRRFDGVKSVDTNVKLKLHLTVAEAQVEARVSDKNVLIRIQCQKHKGLLVKIIREIERLRLSVVNSSVMPFGRSILIITIIAEMEEEFELSAEELARSGRVALFMQLM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0354 208 SUPERFAMILY Carbamate kinase-like 1 90 IPR036393 -
Dere13g0354 208 Gene3D - 3 91 IPR036393 -
Dere13g0354 208 PANTHER BHLH TRANSCRIPTION FACTOR 123 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0354 Dere-ChrDere13 4776341 4778993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0354 127 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 49.351 4.57e-21 87.4