Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0352 ATGTGGGCGTTTCTAATTCAAACTCTTTTAGCACCCACCATCATCTCATACTCTCCCAGAATCAGGCTTCATACGCTCAAGTTGATTTGTGGCTTCATGCTAAAGAACAAGGCTCCTTTGCCTTCGAAGGAGTACTTGCATGGTCAAAGAAGTAAGCTAAGAGAGAGGCAAGAGGGCAAGAAGAGCATCTCAGTGGGCAGAAGAAGTCCTCAGGCACATGATCACATAATTGCTGAGAGAATGAGAAGAGAAAAGATCACGCAGCAGTTTATAGCTCTATCAGCCCTAATTCCTGGCCTCAAGAAGATAAGTTTGTTTGTAGGTGGACAAGGCGACTGTGCTGGAGGAAGCTATAAAGTACGTGAAACAGCTGCAAGAGCATGTGAAAATGCTGGAGGAACAGAGCAAGAAGAAAAGCGTAGAATCTGTGCCTGTGGTGTTTGTGAAGAAATCTCATCTTTCTGTTGA 468 0.4444 MWAFLIQTLLAPTIISYSPRIRLHTLKLICGFMLKNKAPLPSKEYLHGQRSKLRERQEGKKSISVGRRSPQAHDHIIAERMRREKITQQFIALSALIPGLKKISLFVGGQGDCAGGSYKVRETAARACENAGGTEQEEKRRICACGVCEEISSFC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0352 155 MobiDBLite consensus disorder prediction 47 63 - -
Dere13g0352 155 Gene3D - 51 141 IPR036638 GO:0046983
Dere13g0352 155 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 101 IPR036638 GO:0046983
Dere13g0352 155 MobiDBLite consensus disorder prediction 45 67 - -
Dere13g0352 155 PANTHER BHLH TRANSCRIPTION FACTOR 51 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0352 Dere-ChrDere13 4765367 4765906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0352 49 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 53.571 2.12e-12 61.6