Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0343 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCAAAATCTCCACAGACCCGACTTGCACCTTCAGCAGCAGCAGCAACCCGATTCCGAAGAAGACGCGCATCGGGCCGACCTGTTTTCCAGCGATGACGGTCCCCACCAAGGCCTCGAGCTGGCCCCCACTGGCCCCGGCGACATCGTGGCCCGTCGACCTCGCGGGCGCCCACCGGGCTCCAAGAACAAGCCCAAGCCGCCCGTCATCATAACCCGAGAGAGTGCCAACACGCTCCGGGCTCATATTCTGGAAGTGGGGAATGGTTGCGACGTGTTCGAGTGCGTGGCCACCTACGCGCGCCGGAGGCAGCGTGGGATCTGTATTCTAAGCGGCAGTGGCACGGTCACGAATGTGAGCCTAAGGCAGCCTGGAGGAGCGGGAGCTGTAGTGAACCTTCACGGAAGGTTTGAGATATTGTCGTTGTCGGGATCGTTCCTTCCGCCTCCGGCGCCTCCCGGTGCGACGAGCCTGACGATATACTTAGGCGGAGGACAAGGGCAAGTGGTAGGAGGGAGCGTGGTGGGGGAGCTGAGGGCAGCAGGTCCGGTGATTCTGATCGCTGCTTCTTTCACGAACGTGGCGTACGAGAGGCTACCGTTGGACGACGAGGAGCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGTTCAGGGCGGTTCCGGTGGTGGTGGTGGTGGTGGAGGGAATAACCCGTTTCCAGACCCGTCTTCCGGTCTACCCTTCTTCAATTTGCCGCTTAATATGCAGCAGCAGCACAATGTTCAGTTGCCGGTTGACGGCTGGACCGGAAACTCCGGTCCACGTCCGCCTTTTTAA 855 0.6035 MAGLDLGTASRFVQNLHRPDLHLQQQQQPDSEEDAHRADLFSSDDGPHQGLELAPTGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFECVATYARRRQRGICILSGSGTVTNVSLRQPGGAGAVVNLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVILIAASFTNVAYERLPLDDEEQEQLQMQTPGSVQGGSGGGGGGGGNNPFPDPSSGLPFFNLPLNMQQQHNVQLPVDGWTGNSGPRPPF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0343 284 MobiDBLite consensus disorder prediction 27 43 - -
Dere13g0343 284 MobiDBLite consensus disorder prediction 217 257 - -
Dere13g0343 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 222 - -
Dere13g0343 284 ProSiteProfiles PPC domain profile profile. 88 224 IPR005175 -
Dere13g0343 284 MobiDBLite consensus disorder prediction 17 81 - -
Dere13g0343 284 CDD DUF296 92 167 IPR005175 -
Dere13g0343 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Dere13g0343 284 PIRSF ESCAROLA 6 284 IPR014476 GO:0003680
Dere13g0343 284 Gene3D - 91 226 - -
Dere13g0343 284 FunFam AT-hook motif nuclear-localized protein 91 218 - -
Dere13g0343 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 247 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0343 Dere-ChrDere13 4650149 4651003 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0343 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.556 2.67e-104 304