Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0332 ATGGGAGGCGCATCATTGCCACCAGGTTTTCGTTTCCACCCAACAGACGAAGAACTGATAGGATACTATCTAAAAAGAAAAGTAGAGGGGCTTGAAATAGAGCTTGAAGTCATCCCCGTCATTGATTTTTACAAATATGACCCATGGGAGTTACCAGAGAAGTCGTTCCTGCCAAAACGAGATATGGAGTGGTTTTTCTTCTGTCCACGGGATCGAAAGTACCCAAATGGGTCACGAACAAATAGAGCTACAAAAGCTGGATACTGGAAAGCCACAGGAAAAGACAGGAAGGTAGTGTGTGAGTCTACTCCTTCGAATGTGACTGGGTATCGGAAGACTCTGGTTTTCTATCGTGGAAGAGCCCCACTAGGAGATCGAACAGACTGGGTCATGCATGAGTATCGCCTCAGTGATGATCTTGCCCAGCCATCACCGACTTTCCAGGGTGCTTTCGCCTTATGCCGAGTGATAAAAAAGAATGAAAAGGCAAACAGTTCACAGGGAGAACAGAAGGGTAAAGGAGCTGGAAGCAGTTGCACCAGTGGGAATGAAGAAGCCTCAATGAGGATCTCTGGTGACGTGTCGTCTCAAGCAAGCCCTATGACTTCTCCCTACCATATGACTCCAACCACAGCAGAGCTCGAGCAAGCTTCTTCCATGGAGTTCAACCCTTCACATTTCGAGGTCTCCTGTGATTTTATTCTTGATTCTTCAAAGGAGTACCCTCAAATACAAGATGCCATGTCTGGATACTTTCCACAGTACGACTTATCATGTTCCATGAATCCATGGCAACCTTTCCAACATACAGAAACTTCATCCACTTCATCCTACTCAAATTTAAATGGAAAAAATGAATTTGCTGAAGATCTCAATCGAAGTGGGTGCATGTCAGGAAACTTTATGGACTTCTATGGAAATGAGCATGTTTCCTATGAAGGGAAAACAATTTTAATGCATGAGAGGGTCCAATCCCTGTGGGACTGTTGCTTTGAGAAGCATCCAATACTCTCTCTGGCTGCTAATTCTTCATGCCTTGCTGGTGGATGA 1050 0.4486 MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIDFYKYDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCESTPSNVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLSDDLAQPSPTFQGAFALCRVIKKNEKANSSQGEQKGKGAGSSCTSGNEEASMRISGDVSSQASPMTSPYHMTPTTAELEQASSMEFNPSHFEVSCDFILDSSKEYPQIQDAMSGYFPQYDLSCSMNPWQPFQHTETSSTSSYSNLNGKNEFAEDLNRSGCMSGNFMDFYGNEHVSYEGKTILMHERVQSLWDCCFEKHPILSLAANSSCLAGG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0332 349 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Dere13g0332 349 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Dere13g0332 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 228 - -
Dere13g0332 349 FunFam Nac domain-containing protein 86 15 162 - -
Dere13g0332 349 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Dere13g0332 349 MobiDBLite consensus disorder prediction 162 207 - -
Dere13g0332 349 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0332 Dere-ChrDere13 4521021 4523712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0332 1 282 NAC Transcription Factor Family AT4G17980 56.842 4.51e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere13g0332 NAM 1e-38 No_clan