Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0328 ATGAGTGGTAAGATAAGAACAGAGATCATATCTAGAAAATGCATCAAACCAACATCACCTACACCCCAACACCTTAAATCATTCAAACTCTCCCTTCTGGACCAGCTCTCCCCTAACATCCACGGTAACGCCACCTTCTTCTACCCTTCCAACGCCGCCACTGATGGCAGCGCCGGAGCCGGCGACCCCCAATCTCGGTTCTCCACCAAATCCCAACTTCTCCAAAACTCCCTCTCCCAGACGCTCACCCGCTTGTACCCTCTGGTCGGCCGCCTCCGTGACGCGGCCACCATTGACTGCAATGACGACGGTGCTTTCTACGTTGAAGCTCGAACGGACATTCCTCTCTCCGATCTCCTCAGCCAACCAGACTTTGACGCTCTCGAACACTTCCTCCCCACCACCGACAAGGAAACCATGGAATTGTCAAACGGTTCTATGCTCCTCGTACAGTTCACCTTGTTCGGTTGCGGTGGGACCGCCGTGAGCATATCCCTCTCCCACAAGATCGCCGATATAGCGTCCGTGATCACAATCTTTCAGAGCTGGACCGCCGCGTGTCGTGCTGGCACGGAACCGGACATTCCTGATTTGGGCCTCGGAGCTTCTCTCTTCCCTCCGCGAGAAATCCCCGGGATGTCCGGATCTGTAAATATCGGGTCCGAGAAGTTCACTGCGACACGGCTGGTTTTCAGCGGTTCCAAGGTGGGACAGCTCAAGAACAGAGTCGCAACCGCACTAGGAAAAGCCAAAACCGACGCCGACACTCAGTTCCACCCGTCGCGCGTGGAAGTGGTGCTGGCACTGATTTGGAGATGCGCCTTATCGGCGTCCCGTTCCATAACGGGGTCGTTTAAGCCATCCGCTCTGTTCCAAGCCGTGAACCTGCGCCCACGTATGGAGCCACCAGTGCCGGGGACGGCCATCGGGAATTTCGTGTGGCCGTTCGCGGTGACGGTCGAGGAAGAGAAGGAGTTGGAGTTGGAGGAGTTGGTAAAGAAGATGAGAAAGGGGATGATGGAGTTCGTAGAGAAGAAGGCGAGCAAGTTCAAAGAGGAAGGTGGATTTGAAGCTGTGATGGACTTTTTGAAGGAGAGAGGAGAAATGTTGAAGAAGGATAAGGATATAGTAATTTTTAAGTGTTCCAGTTGGTGTAGGTTTCCATTGCTAGAGGTGGATTATGGGTGGGGGAGTCCTGTGTGGATGGCCAGTGTAAATAGGATAGTGAGTAATACTGTAGCTTTGATGGATGTGAGAGATGGTGGGGTTGAAGCTCTGGTGACTTTGAATGAGCAAGAGATGGATATCTTCGAACAACATCATGAGTTGCTCCAATATGCTCAGCTCAATCCTAGAATTGTTATTTGA 1368 0.5249 MSGKIRTEIISRKCIKPTSPTPQHLKSFKLSLLDQLSPNIHGNATFFYPSNAATDGSAGAGDPQSRFSTKSQLLQNSLSQTLTRLYPLVGRLRDAATIDCNDDGAFYVEARTDIPLSDLLSQPDFDALEHFLPTTDKETMELSNGSMLLVQFTLFGCGGTAVSISLSHKIADIASVITIFQSWTAACRAGTEPDIPDLGLGASLFPPREIPGMSGSVNIGSEKFTATRLVFSGSKVGQLKNRVATALGKAKTDADTQFHPSRVEVVLALIWRCALSASRSITGSFKPSALFQAVNLRPRMEPPVPGTAIGNFVWPFAVTVEEEKELELEELVKKMRKGMMEFVEKKASKFKEEGGFEAVMDFLKERGEMLKKDKDIVIFKCSSWCRFPLLEVDYGWGSPVWMASVNRIVSNTVALMDVRDGGVEALVTLNEQEMDIFEQHHELLQYAQLNPRIVI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0328 455 PANTHER F21J9.9 8 447 - -
Dere13g0328 455 Gene3D - 221 447 IPR023213 -
Dere13g0328 455 Pfam Transferase family 8 443 - -
Dere13g0328 455 Gene3D - 5 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0328 Dere-ChrDere13 4499566 4500933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0328 5 439 Monolignol Biosynthesis Gene Families AT5G48930 21.786 1.16e-24 103