Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0327 ATGGGTGCGAAGACCGGAGCAGAAATCATATCTAGAAAGTGCATCAAACCCACCACACCGACACCCCCACGCCTTAAATCTTTCAATCTCTCTCTTCTAGACCAGCTCTCCCCTGACATCTACGGTAACATCACCCTCTTCTATCCCTACAATGCCGCCACTGACAACGGCGGCGGCGGCGACCTTCTCTCCGGTTTCTCCACCAAATCCCAACTTCTCCAGAACTCCCTCTCCCAAACACTCACCCGCTTCTATCCTCTCGCCGGCCACCTCCGTGACGCCGCCACCATCGACTGCAGCGACGACGGCGTCTTCTACATCGAAGCTCGAAACCACTTCCCTCTCTCCTATTTCCTCAGCAACCCAGATTTCGACTCTCTCGAACACTTCCTCCCATCTTCCGACAAGCAAACCATGGCCTTGTCAAACGGCTCTTTGCTTCTCGTCCGGTTCACGTCGTTCAGTTGTGGTGGGACCGCCGTGAGCATATCCATCAACCACAAGATTGCTGACATAGCGACCCTGACGACATTCCTTCAGAGCTGGGCCGCCACGTCTCGCGGAGTCAAAGAGCCGTATATTCCCGACTTGGGCCTCGGCGCTTCCCTCTTCCCTCCACGAGAAATTCCCGGGATGTCCGCATCTGTAAATATCGAGGCCGACAAGTTTACGGCGAGACGGTTCGTTTTTAGCGCTTCCAAGGTGGAAGAACTCAAGAGCAGAGTTGTGACTGCACTCGGAAAAGACTGTCAGTTTCACCCGTCGCGCGTGGAAGTAGTGCTGGCATTGATTTGGAGATGCGCCATGTCAGCATGCAGCTTCAAAACGGGGTCGTTTAAGCCGTCTGCTCTGTTCCAGGGCATGAACCTTCGTCCCCGAATGGAGCCGCGGGTGCCTGGGACAGCGATCGGGAATTTCGTGTGGCCGTTCATTGTGACGGTGGAGGAAGAGAAGGAGTTGGGGTTGCATGTGGTGGTCAAGAAGATGAGGGAGGGAATGAGGGAGTTCGAGGAGAAGAAGGCGAACAAGTTCAGAAAGGGAGGAGGATATGAAGCGGTGATGGAGTTTCTGAAGGAGAGGAAGGAGATGTTGAAGAAGAAGGAGAAGGAGATAGTGGTTTATAAGTGTTCGAGCTGGTGTAGGTCTCCATTGCTAGAGGTGGATTATGGGTGGGGGAATTCTGTGTGGACGTCGAGTGTGAATAAGATGGTGAGTAATACGATTGCTTTGATGGATGGGAGAGATGGAGGAGTTGAAGCACTAGTGACTTTGGATGAGCAAGAGATGGATATCTTTGAACAACATCATGAGTTGCTCCAATATGCTTGGCTTAATCCTAGCGTTGTTTTTCCACCCTTTACCACTTCTAAACCTAAACTTTTTATCAGTGCAGCACTATAA 1401 0.5196 MGAKTGAEIISRKCIKPTTPTPPRLKSFNLSLLDQLSPDIYGNITLFYPYNAATDNGGGGDLLSGFSTKSQLLQNSLSQTLTRFYPLAGHLRDAATIDCSDDGVFYIEARNHFPLSYFLSNPDFDSLEHFLPSSDKQTMALSNGSLLLVRFTSFSCGGTAVSISINHKIADIATLTTFLQSWAATSRGVKEPYIPDLGLGASLFPPREIPGMSASVNIEADKFTARRFVFSASKVEELKSRVVTALGKDCQFHPSRVEVVLALIWRCAMSACSFKTGSFKPSALFQGMNLRPRMEPRVPGTAIGNFVWPFIVTVEEEKELGLHVVVKKMREGMREFEEKKANKFRKGGGYEAVMEFLKERKEMLKKKEKEIVVYKCSSWCRSPLLEVDYGWGNSVWTSSVNKMVSNTIALMDGRDGGVEALVTLDEQEMDIFEQHHELLQYAWLNPSVVFPPFTTSKPKLFISAAL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0327 466 Pfam Transferase family 8 438 - -
Dere13g0327 466 PANTHER F21J9.9 8 442 - -
Dere13g0327 466 Gene3D - 7 211 IPR023213 -
Dere13g0327 466 Gene3D - 220 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0327 Dere-ChrDere13 4487111 4488511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0327 71 434 Monolignol Biosynthesis Gene Families AT5G48930 21.538 1.69e-17 82.8