Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0313 ATGGAGTTCCTGGACGAGGACGCTAGGCCAAGATTCCTCTTCCAATCTCAAGCAAAAGCTTCTTCAGTCTCAGAATCACAAGCTTACAAGAAACCAAGCAAGCCATTTCTCTTCTTCACTATCTCACTTTCTTGCCTTTTCTTTGCTTTCTCAATTTTCTTCCTTCAATCCGAACCCTTTAAATCGCTCCTCATCTGGCTCTCCCTTTCTCTCCTTATCGGTCCCTTTGCCCCCATTTCGCTCACCGGCGGTGACGTACGCGTAGGCCATGGTTCAATTGTTGAGTTCCCCAATCAAGAAACCACAAACGATGAGGAAACAAAGCATAGGTCGTCTCAGAAAAGATCCAAAACTCGTAGATCTGAGGATATCGCTGTTGGTCCAGTTGCATCGATCGAGAACGTTATAATGTCTGGGCGTGAAGAGAAGAAGAATCAAGCGAGTGGAGGCGGTGGGAATGGTATGGTACTGAAGGAAGAGAAGGAATGGACTGAAGAGGACATTGAGGTTTTGAGGAAGCAGATGTTGAAACACCCAGTGGGAAAACCTAGACGATGGGAGGTAATTGCAGAGGCATTCGGGGGGCGGCGTAGGATGGAGAATGTGATCAAGAAGGCAAAGGAATTAGGAGAGAAGAAACTGGATGACGCTGACTCGTATTCACAGTTTTTGAAGAAGAGGAAGCCGGTGGATAAAAGACTTGAGAGTGAGAATGAGACTGAAAATTTGGGAGGTGAATCGGTGGAGAAAGCTGTCAATAATACTAGTGAAGGACCTGGAAATGGTTGGAGCACAGGGGAGGATATTGCACTTCTTAACGCTTTGAAGGTATTCCCTAAGGATGTTGCTATGAGATGGGAGAAGATTGCAGCAGCAGTACCGGGGAAATCCAAAGCGGCTTGCATGAAAAGAGTCGCTGAACTGAAAAAGGAGTTTCGGAGCGCAAAAGCTGCCACCGAGGGGTAG 966 0.47 MEFLDEDARPRFLFQSQAKASSVSESQAYKKPSKPFLFFTISLSCLFFAFSIFFLQSEPFKSLLIWLSLSLLIGPFAPISLTGGDVRVGHGSIVEFPNQETTNDEETKHRSSQKRSKTRRSEDIAVGPVASIENVIMSGREEKKNQASGGGGNGMVLKEEKEWTEEDIEVLRKQMLKHPVGKPRRWEVIAEAFGGRRRMENVIKKAKELGEKKLDDADSYSQFLKKRKPVDKRLESENETENLGGESVEKAVNNTSEGPGNGWSTGEDIALLNALKVFPKDVAMRWEKIAAAVPGKSKAACMKRVAELKKEFRSAKAATEG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0313 321 CDD SANT 263 304 IPR001005 -
Dere13g0313 321 MobiDBLite consensus disorder prediction 101 122 - -
Dere13g0313 321 MobiDBLite consensus disorder prediction 97 123 - -
Dere13g0313 321 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 142 318 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Dere13g0313 321 SUPERFAMILY Homeodomain-like 260 308 IPR009057 -
Dere13g0313 321 MobiDBLite consensus disorder prediction 247 262 - -
Dere13g0313 321 SMART sant 259 311 IPR001005 -
Dere13g0313 321 SMART sant 159 212 IPR001005 -
Dere13g0313 321 MobiDBLite consensus disorder prediction 231 263 - -
Dere13g0313 321 Gene3D - 254 321 - -
Dere13g0313 321 CDD SANT 162 209 IPR001005 -
Dere13g0313 321 Gene3D - 157 215 - -
Dere13g0313 321 SUPERFAMILY Homeodomain-like 161 209 IPR009057 -
Dere13g0313 321 FunFam Myb family transcription factor 257 317 - -
Dere13g0313 321 ProSiteProfiles Myb-like domain profile. 263 304 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0313 Dere-ChrDere13 4342743 4343708 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere13g0313 None None None