Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0306 ATGGCCATGCTACGGCAAGCTTCACGCCTCTGGGCTCAACCACTGAGGGTTCGACGGCTTTGTACGGAAGTCCCAGCCACTGCTTCCGCCGATCCTGCTTTCCTGGATTCATGGAAGAAAGCCATTCCCAACATGGACCCACCCAGGACTCCTTCCCTTTACATGCACTCTCGTCCTCCCACTCCTTCCTCCATCCCCTCTAAGATCACTGTCAATTTTGTTCTGCCCTACGCATCTCAGCTTTCTAGCAAGGAGGTGGACATGGTGATTATACCAGCAACTACTGGACAAATGGGTGTTTTGGCCGGCCATGTACCCACAATTGCAGAACTGAGGCCAGGGATCTTGTCCGTGCATGAGGGAAATGATGTTTCAAAATATTTTGTTAGCAGTGGATTTGCCTTCATCCATGCAAATTCTGTTGCAGATGTAATTGCCGTTGAGGCCGTTCCAATTGACCAGATTGACCAAAGCCTAGTCCAGAAGGGGCTTGCTGAGTTCACCCAGAAGCTCGCCTCTGCTACCACTGACTTGGAGAAAGCTGAAGCACAGATTGGCGTAGATGTTCACAGTGCCCTAAATTCTGCCCTCTCTGGTTGA 600 0.5083 MAMLRQASRLWAQPLRVRRLCTEVPATASADPAFLDSWKKAIPNMDPPRTPSLYMHSRPPTPSSIPSKITVNFVLPYASQLSSKEVDMVIIPATTGQMGVLAGHVPTIAELRPGILSVHEGNDVSKYFVSSGFAFIHANSVADVIAVEAVPIDQIDQSLVQKGLAEFTQKLASATTDLEKAEAQIGVDVHSALNSALSG 199
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0306 199 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986
Dere13g0306 199 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 69 150 IPR036771 -
Dere13g0306 199 Coils Coil 164 184 - -
Dere13g0306 199 CDD F1-ATPase_delta 69 192 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dere13g0306 199 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 30 198 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dere13g0306 199 FunFam ATP synthase delta 58 155 - -
Dere13g0306 199 Hamap ATP synthase epsilon chain [atpC]. 67 187 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dere13g0306 199 FunFam ATP synthase subunit delta 156 198 - -
Dere13g0306 199 Gene3D - 156 198 - -
Dere13g0306 199 Gene3D - 58 155 IPR036771 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g0306 Dere-ChrDere13 4264888 4266838 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0306 3 199 Primary Pumps ATPases AT5G47030 70.244 1.00e-103 295