Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere13g0306 | ATGGCCATGCTACGGCAAGCTTCACGCCTCTGGGCTCAACCACTGAGGGTTCGACGGCTTTGTACGGAAGTCCCAGCCACTGCTTCCGCCGATCCTGCTTTCCTGGATTCATGGAAGAAAGCCATTCCCAACATGGACCCACCCAGGACTCCTTCCCTTTACATGCACTCTCGTCCTCCCACTCCTTCCTCCATCCCCTCTAAGATCACTGTCAATTTTGTTCTGCCCTACGCATCTCAGCTTTCTAGCAAGGAGGTGGACATGGTGATTATACCAGCAACTACTGGACAAATGGGTGTTTTGGCCGGCCATGTACCCACAATTGCAGAACTGAGGCCAGGGATCTTGTCCGTGCATGAGGGAAATGATGTTTCAAAATATTTTGTTAGCAGTGGATTTGCCTTCATCCATGCAAATTCTGTTGCAGATGTAATTGCCGTTGAGGCCGTTCCAATTGACCAGATTGACCAAAGCCTAGTCCAGAAGGGGCTTGCTGAGTTCACCCAGAAGCTCGCCTCTGCTACCACTGACTTGGAGAAAGCTGAAGCACAGATTGGCGTAGATGTTCACAGTGCCCTAAATTCTGCCCTCTCTGGTTGA | 600 | 0.5083 | MAMLRQASRLWAQPLRVRRLCTEVPATASADPAFLDSWKKAIPNMDPPRTPSLYMHSRPPTPSSIPSKITVNFVLPYASQLSSKEVDMVIIPATTGQMGVLAGHVPTIAELRPGILSVHEGNDVSKYFVSSGFAFIHANSVADVIAVEAVPIDQIDQSLVQKGLAEFTQKLASATTDLEKAEAQIGVDVHSALNSALSG | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere13g0306 | 199 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 70 | 141 | IPR020546 | GO:0015986 | |
Dere13g0306 | 199 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 69 | 150 | IPR036771 | - | |
Dere13g0306 | 199 | Coils | Coil | 164 | 184 | - | - | |
Dere13g0306 | 199 | CDD | F1-ATPase_delta | 69 | 192 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Dere13g0306 | 199 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 30 | 198 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Dere13g0306 | 199 | FunFam | ATP synthase delta | 58 | 155 | - | - | |
Dere13g0306 | 199 | Hamap | ATP synthase epsilon chain [atpC]. | 67 | 187 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Dere13g0306 | 199 | FunFam | ATP synthase subunit delta | 156 | 198 | - | - | |
Dere13g0306 | 199 | Gene3D | - | 156 | 198 | - | - | |
Dere13g0306 | 199 | Gene3D | - | 58 | 155 | IPR036771 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere13g0306 | Dere-ChrDere13 | 4264888 | 4266838 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere13g0306 | 3 | 199 | Primary Pumps ATPases | AT5G47030 | 70.244 | 1.00e-103 | 295 |