Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0294 ATGTCTTGCTCGTCGGAGAACTCGGAGTGTTCTGACCTGAAGACGGCAAAGTCGCCGGAGCAGTCAACGTTCTCTCACACCTGTAGTCTGTTGAGTCAGTACCTCAAGGAAAAAGGAAGCTTCGGAGATCTTAGTCTCGGGATGACATGCAACATTGAAGGAAGTGGGTCACCTGAGGTAGCTTTTCACTCTGCAACAATCATGAACCTACTTCCTACCAAGACACCTCAAAGCCCGACTCCTATGAACTTTAGCGTAACTAAATCTGTGAATAAGGAGCCTAAAGCTGCACAGTTGACAATCTTTTATGGTGGGCAAGTGCTTGTTTTTGATGATTTTCCAGCTGAGAAATTTAAGGAGATCATGTCCTTTGCAAGCAAAGGAATCTCTCAAAGCCAGAACAGATCTCCAATTCATCATCCTAATGTTAATATCATACCTAATGCTGCTAACAATTTGGTTCAAGAGCAACCTCAAGCACCACCCAGACCTGTTATTGGTGATCTGCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATCGCTGCCAGAGCACCATATCAAACAACCAATCCCAACAAGCCATCTGAACCCATGCCATGGGTTGGGTTATCGCCTAATTCACCGCAAGTCTGA 657 0.4505 MSCSSENSECSDLKTAKSPEQSTFSHTCSLLSQYLKEKGSFGDLSLGMTCNIEGSGSPEVAFHSATIMNLLPTKTPQSPTPMNFSVTKSVNKEPKAAQLTIFYGGQVLVFDDFPAEKFKEIMSFASKGISQSQNRSPIHHPNVNIIPNAANNLVQEQPQAPPRPVIGDLPIARKASLHRFLEKRKDRIAARAPYQTTNPNKPSEPMPWVGLSPNSPQV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0294 218 ProSiteProfiles Tify domain profile. 92 127 IPR010399 -
Dere13g0294 218 Pfam tify domain 93 126 IPR010399 -
Dere13g0294 218 Pfam Jas motif 170 195 IPR018467 -
Dere13g0294 218 SMART tify_2 92 127 IPR010399 -
Dere13g0294 218 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 201 IPR040390 -
Dere13g0294 218 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0294 Dere-ChrDere13 4123815 4125640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0294 5 212 Tify Gene Family AT1G19180 40.239 4.15e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dere13g0294 tify 2.7e-17 No_clan