Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0286 ATGCTCGGCGCTTCGATCTCCTCCCACTCAGAAATGGCCTGGCACCTTGCAGCTCTTCTTATATCAGTTGGTCGTCCGGCACACCTCGCCGATCTCGCTTCCCGATGCACACTGTTCAGTGCTTCTCCCGAGCTAGTCGAGTTCCTCTGCTCCATCCCCAAATCTCCCATCTTCTTGACCTCCGATCTCTATGTGACTCTCTCTGCTGTGGCTCTCGTCGCTGTTGGACGCTTCATCTCGGTCACCGATTTTATTGGTTCTCATCGCCTGCCTAGTGTTGGAATCAGAGTTTCCGCAGTAGACAATTGGTGGAATGATGTCATTTCAAGTTTCTGCTTCAGGAAACGTAAACGGAAGTTCTTTTCTGATTGTGATTTTCCTCCCGTTGCGAAAAGAGTAATCAATTCTTATTCTATACACGGTAACAAGTTCTTCCAATTTCTGATTTCATCTAATTCTTTCCACCTTGACCAAAAAGTTGATGATTTAAATGCTGAAATTGATACGAAGAAGTCAGCGACACCAGGAGAGGAACTTGAGAAAGCAATTCAGATAGAATCTAAGTCAGATGTAGAAGTAGAACTTGTTTCTCCTTCAAGCATTTTGGAAAGTCCAGCTCAGTGCAGAGAAGCTAAAGTAGAAGAGACTTTGAAAAGTAGGACAAAAGTCAATGAAGCATTGAAAGATTTCAATGGTAGCAATATGTCACCATTGGAGGGTGACAACGTTAATGGCAACATGGTAGATCCTAACATTAGAATAACTGACAGAAAAAGAATCTTGGAATGCAAGAAGGCATCACGGTTAATGAGTTCCTCTAGCATGAAACCTGTTGAAAACATGATACAGCCATCAAATACTACTGTTTTGCCCAAAGGTGACATTAGAAGGACCCATAATGAAAACTGTGAGCAAGTTAAGAATTTAAGTGGAAAGCAAATGGTAGCAGATGTGAAGAATATGGACATCTCCAAGGATCCCCTTTCTTTTCAGAAGTTACCTCAGTCCCCTTCCAAGCCGAATGCCATGCAATGTGATGCAAATGCTCCTAATCCGCAAGACCTACGTAAGACTTTACATAATGATGTGAACATTGATTGTCATAAAGTGAAACAGCACTATAATAGAGATCAGGCATCAGTCAGTAAGCGGCAGAAAAAGAATTGCACTGGCATGCATATCAAGGAAAAAAGGGGAACTTCATTCTCAATGTGTTCTGAGGATCAAAAGGAGCCTAAAGAGCTTCCAACATTTGAATCGTACATTGTAGAGGAAAAAGAAGGGTCAGGCCCTCATGCTAGAGCTCATGGGCAATGTGTTATCAATGAGATAAAAGTTCTGGAGCGATTTGGAGGCAGAAACTTTATAATTAAATATGAAGGCAGCTTCAAGAATGGAAATGCTGATTGCATTGTTCTTGAACATATTGAGCACGACAGACCTGAGGTGTTAAGGAAAGAAATTGATGTTGTTCAACTCCGATGGTATGGCTTTTGCATGTTCAGGGCTCTTGCAAGTCTTCACAAGCGGGGGGTAATACACAGAGATGTAAAACCTGGCAATTTCCTTTTCTCCCGTAAGCTTAATAAAGGTTATCTTATTGACTTCAATCTTGCCAAGGATCTGCATCAGAAGCATGGAAATATCAGGTGTGGTTTAATCATTGATCACAAAAAACGTTCTGTTGAAAATTCTACAGCTTCAACCAAGTGCAGAAGGTTCCCAATTGTCAATTTTTCGGAAGCAGCCAATCAGCAGACAACTAATGGCTCCAGGTCAATTTTAGATCCAAAGGACAACAGAAGAAAGACTATGGTGCAGTCAAAGACTAAAACTGACAGAGGTAGTGGGAAGGTATTGTTCAAGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCTGGTGTATCCTTACTCTATCTCGTAATTGGAAGAACACCTTTCACCGGTGATCCTGAACAGAACATTAAGGATATAGCTAAACTGAGAGGCAGTGAGGATCTATGGGAGGTTGCTAAGCTACACAACCGGGAATCCTCATTCCCTGTGGACCTATACGACAAACGTAGTTTGCCATCTACTGGACTTCAAGATTGGTGCTTAATGAACACTAAGAGACCAGAGCACCTTGAAGTCATTCCCGATTCACTTTTTGATCTTCTAGATAAGTGCTTGACGGTGAACCCTAGACTGAGAATCGGTGCAGAGGAAGCTCTCAAGCATGAGTTTTTTGCTCCATGCCAGGAGAGCCTGAGAAAGCAGAGGTTGTGTAAGCAGGAATTGTTGAGTTGA 2295 0.424 MLGASISSHSEMAWHLAALLISVGRPAHLADLASRCTLFSASPELVEFLCSIPKSPIFLTSDLYVTLSAVALVAVGRFISVTDFIGSHRLPSVGIRVSAVDNWWNDVISSFCFRKRKRKFFSDCDFPPVAKRVINSYSIHGNKFFQFLISSNSFHLDQKVDDLNAEIDTKKSATPGEELEKAIQIESKSDVEVELVSPSSILESPAQCREAKVEETLKSRTKVNEALKDFNGSNMSPLEGDNVNGNMVDPNIRITDRKRILECKKASRLMSSSSMKPVENMIQPSNTTVLPKGDIRRTHNENCEQVKNLSGKQMVADVKNMDISKDPLSFQKLPQSPSKPNAMQCDANAPNPQDLRKTLHNDVNIDCHKVKQHYNRDQASVSKRQKKNCTGMHIKEKRGTSFSMCSEDQKEPKELPTFESYIVEEKEGSGPHARAHGQCVINEIKVLERFGGRNFIIKYEGSFKNGNADCIVLEHIEHDRPEVLRKEIDVVQLRWYGFCMFRALASLHKRGVIHRDVKPGNFLFSRKLNKGYLIDFNLAKDLHQKHGNIRCGLIIDHKKRSVENSTASTKCRRFPIVNFSEAANQQTTNGSRSILDPKDNRRKTMVQSKTKTDRGSGKVLFKSPHQGPKLDIWSAGVSLLYLVIGRTPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPVDLYDKRSLPSTGLQDWCLMNTKRPEHLEVIPDSLFDLLDKCLTVNPRLRIGAEEALKHEFFAPCQESLRKQRLCKQELLS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0286 764 MobiDBLite consensus disorder prediction 585 622 - -
Dere13g0286 764 MobiDBLite consensus disorder prediction 595 609 - -
Dere13g0286 764 FunFam Kinase like protein 476 545 - -
Dere13g0286 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Dere13g0286 764 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 308 754 - -
Dere13g0286 764 SUPERFAMILY Protein kinase-like (PK-like) 438 747 IPR011009 -
Dere13g0286 764 Pfam Protein kinase domain 620 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0286 764 Pfam Protein kinase domain 438 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0286 764 Gene3D Transferase(Phosphotransferase) domain 1 484 762 - -
Dere13g0286 764 SMART serkin_6 421 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0286 764 ProSiteProfiles Protein kinase domain profile. 392 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0286 Dere-ChrDere13 4064747 4070269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0286 417 664 AGC Kinase Gene Family AT5G09890 25.000 1.70e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Dere13g0286 Pkinase 1.2e-11 CL0016