Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0279 ATGTGCCGTCAAAATTCTCCTGTCCATCGTTCTGCCGAAGAAGAAACCGCAGCTGATGAGAGTCTTCTAATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTTCTCTTCATAATCCTTCATACCTTAGGAGATGTTTGCGCTACAAATTACGAGCGAGGCATAAAAGGAGGTTAAGAGTTGGGATTGTGATTTTCAATTATAGGGACTGTTACAGCACAATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCTGTGTGCAAGCTTTAAGGGTTTGCGATTTCATCTATGTGCATCACATGATCTATTCAACTTTGAGTTTTGGGTGACTGAAGGCTATCAAGCAGTAAATGTCTCTGTGAAGATTGATATATTGAGATCAGAGAATGTCACTGATGGAATAAATCCACAGTCACAAATCTTCTTCTTCTGTGCAAGGCCTCGACAACGTATACGCAGGGATTCTATTCAAAATGAAAAGCGTGCCAGTGTACAGTTCCTGGAGTTAGACTCACCCATGTTGGCTACAGAAGGCATACAGAATGGTTGTCAAGAGAAGTACCGTGATATCATGTCCAGCAAAAGTGAGAACTTGTCTAAGACATCTCCCAGTCAAAAGGACATGCAGAATGGAAGACATGATGGAGAAAAATTTGGTCCTCATTGCCCTGGCTCTGCAGATTATGTGGAACATGTTGCATCTAGTTTTAACATTCCAGGTGTTCCAATTGCCATGCCCCAATCTTCTAGGGACCCTGAATGTAATAAATCAGTATCTAGATGTGATTCTGCTTTGCCTGCCAAGACAAGGAAGTTGAACATGGATCGATCAGACTCGAGAAACCGTATGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGACCGGGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGATGTTTCCAAAGACGAAAAGCAGCTTATGCATCTCTGGAACTCTTTTGTGAGGAGGCAAAGTGTGCTGGCGGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTTTCCAAGCTTCATGGAAAGGAGTTGGTCTCATCTCCCACTTTGTTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGCCTTCTTGATGCTTCGACGATGAACAACTGTAGTATAATTTTGGATAGTTTCAGAAACGAGGGATCTGATGCTGGCAAAAATTGA 1299 0.4242 MCRQNSPVHRSAEEETAADESLLIYCKPVELYNILYRRSLHNPSYLRRCLRYKLRARHKRRLRVGIVIFNYRDCYSTIRKTEVTEDFSCPFCLMLCASFKGLRFHLCASHDLFNFEFWVTEGYQAVNVSVKIDILRSENVTDGINPQSQIFFFCARPRQRIRRDSIQNEKRASVQFLELDSPMLATEGIQNGCQEKYRDIMSSKSENLSKTSPSQKDMQNGRHDGEKFGPHCPGSADYVEHVASSFNIPGVPIAMPQSSRDPECNKSVSRCDSALPAKTRKLNMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRRQSVLADGHVPWACEAFSKLHGKELVSSPTLFWCWRLFMIKLWNHGLLDASTMNNCSIILDSFRNEGSDAGKN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0279 432 CDD ZnB-Zn_EMF2-like 13 134 - -
Dere13g0279 432 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Dere13g0279 432 MobiDBLite consensus disorder prediction 204 228 - -
Dere13g0279 432 Pfam VEFS-Box of polycomb protein 282 417 IPR019135 -
Dere13g0279 432 CDD VEFS-box_EMF2-like 295 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0279 Dere-ChrDere13 4005342 4012335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0279 1 68 C2H2 Transcription Factor Family AT5G51230 54.412 2.58e-13 70.1