LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere13g0273	ATGGCTGCATTCATCTTCTTCATCCTCTTCTGGGTTTCCATCTTCCAGAATTCTGTTCAGATCCTCAATGCAAATTCCCCTGCTTCCAAGTGCAGCAATGGCGGTCCCGATATTTCCCATCCTTTTCATATAAAATCCCAACAACCTCGTCAGTACGAGGTTCGCTCTGGTTTTGAGCTGTTTTGCAGAGACAACCTCACCGCCATTCACTTCCCATCTCATGGCGATTTGGTAGTGAAATCCATTTCCTACGACACCAAAAGAATCGATCTTCTTGACCCCAGGAACTGTGCCCACGAAGTGTTTCTGAACCTTGATCTCTCTCTCACGCCATTTCGATACTATTATGTTCTGAAAAACTACACTTACTTGAATTGCTCGACAAGCCTTTCGCCTCCTTTCATGGAGGTTCCTTGTTTGAGTGGATCCAATTACCATGTTTACACAGTTGACCCTTCCTTGACCGTACCAGGTTCTTGTGTGACAGTTAAAACCGTTGCAATACCCTTCGAATATAGCCCATATCTCTCCGACAATACTCTTGGTCTTGGATTAACTTGGGACTTGCCTCAATCTGAAGAAACCAAAACAGGTCATACAGTTCTAAGCATCAGCATGTGTGTCATTGCGATAGCAGTTCTGATAAGCATAAAGGTTCAGTGGTCAAGGAGGAATTTCCATCAGAAAGAAGGACAATTACTACAGAGCTTGGACCATGAGCTATATAAACAACTTGAGCTTGTACCAAAGGACCCAACTGATGAAAGATGGAAGTGGCTTAAGAATTGCATCGGTGCACTTGATGGGACTCATATTAGGATTAAGGTACCATTGCAAGACCAACCGAGTTGTGTGAGTAGTGTATGTGTTTCATTATTTAACAACTTCGATAAGTCATATGCATTGTTTGTAATTTTGGTGGCCATACAGGCCACATGTGACTTCAAGGATGATAATGGTGACACTCTTATTGAAGTTAACATTAAGGACATTGATGTTGCCATTGACTTAGCTAAAGTGAAGGGCTTAATGGAGTGGGAGTGTATCTATGCTCACTTGAAGATTGCAGACAATGATAGGCTAATGGTGGCTTTCTCTGGAATGGCTTACCATCTTAAGGCTACATGGACAAGGGAACTCATAGGATAG	1149	0.4265	MAAFIFFILFWVSIFQNSVQILNANSPASKCSNGGPDISHPFHIKSQQPRQYEVRSGFELFCRDNLTAIHFPSHGDLVVKSISYDTKRIDLLDPRNCAHEVFLNLDLSLTPFRYYYVLKNYTYLNCSTSLSPPFMEVPCLSGSNYHVYTVDPSLTVPGSCVTVKTVAIPFEYSPYLSDNTLGLGLTWDLPQSEETKTGHTVLSISMCVIAIAVLISIKVQWSRRNFHQKEGQLLQSLDHELYKQLELVPKDPTDERWKWLKNCIGALDGTHIRIKVPLQDQPSCVSSVCVSLFNNFDKSYALFVILVAIQATCDFKDDNGDTLIEVNIKDIDVAIDLAKVKGLMEWECIYAHLKIADNDRLMVAFSGMAYHLKATWTRELIG	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere13g0273	382	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	4	196	IPR046948	-
	Dere13g0273	382	Pfam	Wall-associated receptor kinase galacturonan-binding	30	92	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere13g0273	Dere-ChrDere13	3909826	3915899	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere13g0273	31	196	C3H Transcription Factor Family	AT2G25410	31.818	5.04e-16	77.0