Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0243 ATGGCTACTCTGTGGCGTCTCTTCATCTCGCTGCAAGTGCTCTTGTTCATCCCTTCCTTACTTCATGCACTAACTGTAACACCCACAAAAACCTACCACAGGTGGGTGAGACCCACCAGTCATCGCGTAATCACCGTCGCCGTCAACGGAGGTGGCCATTTCCGGTCCGTCCAAGCTGCCGTCAATGCTGTTCCAGACGACAATAGAATGAACGTCCTTATTCAAATTAGTGCGGGACACTTTATAGAGAAGGTGGTGGTGCCGGTGACGAAGCCGTACATAACGTTTCAGGGAGCGGGGAGAGATGTGACAGTGATAGAATGGCATGACAGGGCCAATGACCTTGGCCCCAGTGGACAACAATTACGTACTTATAGAACAGCTTCTGTCACTGTTTTCGCCAACTTTTTCTCTGCTAGGAATATCAGCTTCAAGAACACAGCGCCGGCGCCGATGCCGGGGATGGAGGGATGGCAAGCGGCGGCGTTTAGGATATCAGGGGACAAAGCATACATGATGGGATGCGGTTTCTACGGTGCACAAGACACTCTTTGCGATGACGCTGGCCGCCATTACTTCAAGGATTGTTATATCGAGGGCTCCATTGATTTCATCTTTGGAAATGGCAGGTCCATTTACAAGGATTGCGAGCTGCGCTCAATAGCGACGAGGTTCGGGTCAATAGCAGCCCAAGATAGGAAGAGCCCAATGCAGAAAACAGGGTTTGCATTCGTAGGGTGCAAGGTGACGGGTTCCGGGCCCATATATGTGGGCCGAGCAATGGGCCAATATTCAAGAATTGTCTACGCCTATACATATTTCGACGACATCGTCGCGCATGGTGGTTGGGACGATTGGAACCACGCGCCAAACAAGAACAAGACTGTACTGTTCGGAGTGTACAAGTGCTGGGGCCCAGGAGCTGAGTCATTGCGTGGGGTCTCGTGGGCCCCAGAGCTAGATTTCGAATCGGCGCATCCATTTCTTGTGAAAAGTTTCGTCAATGGAAGACATTGGATTCCCCCCTCTGATGCATAG 1038 0.5145 MATLWRLFISLQVLLFIPSLLHALTVTPTKTYHRWVRPTSHRVITVAVNGGGHFRSVQAAVNAVPDDNRMNVLIQISAGHFIEKVVVPVTKPYITFQGAGRDVTVIEWHDRANDLGPSGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYMMGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSIYKDCELRSIATRFGSIAAQDRKSPMQKTGFAFVGCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWNHAPNKNKTVLFGVYKCWGPGAESLRGVSWAPELDFESAHPFLVKSFVNGRHWIPPSDA 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0243 345 Gene3D - 38 344 IPR012334 -
Dere13g0243 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 340 - -
Dere13g0243 345 FunFam Pectinesterase 39 342 - -
Dere13g0243 345 Pfam Pectinesterase 44 336 IPR000070 GO:0030599|GO:0042545
Dere13g0243 345 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Dere13g0243 345 SUPERFAMILY Pectin lyase-like 38 343 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g0243 Dere-ChrDere13 3545543 3547555 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0243 7 345 Carbohydrate Esterase AT5G47500 71.014 0.0 523